Duplicate Prefixes

If two concepts with the same prefix appear in the same equivalence component, there is typically an error in curation. One prominent place where this happens is WikiPathways, where multiple curators may have their own entry for the same pathway. Even further, WikiPathways imports equivalent pathways to their own curated ones from sources like NetPath.

1. • draft animal (agro:00000116)
   • draught animals (agrovoc:10457)
   • working animals (agrovoc:8446)
2. • plant transplanting process (agro:00000229)
   • replanting (agrovoc:13811)
   • transplanting (agrovoc:7873)
3. • forage harvester (agro:00000540)
   • choppers (agrovoc:24001)
   • forage harvesters (agrovoc:25763)
4. • vermicompost (agro:00002042)
   • vermiculture (agrovoc:24262)
   • vermicomposts (agrovoc:c319a4d3)
5. • seed dressing (agro:00000051)
   • seed dressing (agrovoc:26820)
   • seed treatment (agrovoc:6940)
6. • biological pest control process (agro:00000022)
   • biological pest control (agrovoc:330635)
   • biological control (agrovoc:918)
7. • MDA-MB-231 (ccle:MDAMB231_BREAST)
   • MDA-MB-231 cell (clo:0007634)
   • MDAMB231 cell (clo:0037291)
   • MDAMB231 (efo:0001209)
   • MDA-MB-231 Cells (mesh:D000092302)
8. • RH-30 (ccle:RH30_SOFT_TISSUE)
   • SJRH30 (ccle:SJRH30_SOFT_TISSUE)
   • Rh30 (cellosaurus:0041)
   • SJRH30 (efo:0002329)
9. • sensory neuron (cl:0000101)
   • sensory receptor cell (cl:0000197)
   • Sensory Receptor Cells (mesh:D011984)
10. • BCG (cpt:90585)
    • BCG (cpt:90728)
    • Bacillus Calmette-Guerin vaccine (cvx:19)
    • BCG Vaccine (dron:00012890)
    • BCG vaccine (drugbank:DB12768)
    • BCG Vaccine (mesh:D001500)
    • BCG Vaccine (ncit:C298)
    • BCG vaccine (vo:0000771)
11. • chlamydia (doid:11263)
    • Chlamydia (mesh:D002689)
    • Chlamydia Infections (mesh:D002690)
12. • Smallpox Vaccine (dron:00017235)
    • Smallpox Vaccine (mesh:D012900)
    • Smallpox virus vaccine (vo:0000651)
    • smallpox vaccine (vo:0004613)
13. • 0.65 ML Varicella-Zoster Virus Vaccine Live (Oka-Merck) strain 29800 UNT/ML Injection (dron:00771506)
    • 0.65 ML Varicella-Zoster Virus Vaccine Live (Oka-Merck) strain 29800 UNT/ML Injection (vo:0003272)
    • 0.65 ML Varicella-Zoster Virus Vaccine Live (Oka-Merck) strain 29800 UNT/ML Injection (vo:0003280)
14. • antimicrobial agent (chebi:33281)
    • antimicrobial (ido:0000558)
    • microbicide (ido:0000563)
    • antibiotic (idomal:0000643)
15. • protein-containing complex (go:0032991)
    • protein complex (go:0043234)
    • protein complex (idomal:0000732)
16. • sulfoxide (chebi:22063)
    • sulfoxide (chebi:35813)
    • sulfoxide (idomal:0000895)
17. • Natural Language Processing (aio:Natural_Language_Processing)
    • Natural language processing (ito:00141)
    • NLP (ito:39650)
18. • Continual Learning (aio:Continual_Learning)
    • Continual learning (ito:01486)
    • Incremental learning (ito:17479)
    • Incremental learning (ito:23552)
19. • Long Short Term Memory (aio:LSTM)
    • LSTM (ito:18262)
    • lstm (ito:19480)
20. • Random Forest (aio:Random_Forest)
    • Random Forest (ito:28410)
    • random forest (ito:39395)
21. • Logistic Regression (aio:Logistic_Regression)
    • Logistic Regression (ito:29161)
    • Logistic regression (ito:31970)
22. • Steroid biosynthesis - Homo sapiens (human) (kegg.pathway:hsa00100)
    • Steroid hormone biosynthesis - Homo sapiens (human) (kegg.pathway:hsa00140)
    • Steroid biosynthesis (wikipathways:WP496)
23. • ABC transporters - Homo sapiens (human) (kegg.pathway:hsa02010)
    • Mitochondrial ABC transporters (reactome:R-HSA-1369007)
    • ABC-family proteins mediated transport (reactome:R-HSA-382556)
24. • MAPK signaling pathway - Homo sapiens (human) (kegg.pathway:hsa04010)
    • MAPK family signaling cascades (reactome:R-HSA-5683057)
    • MAPK signaling pathway (wikipathways:WP382)
    • MAPK cascade (wikipathways:WP422)
25. • Apoptosis - Homo sapiens (human) (kegg.pathway:hsa04210)
    • Apoptosis - multiple species - Homo sapiens (human) (kegg.pathway:hsa04215)
    • Apoptosis (reactome:R-HSA-109581)
    • Apoptosis (wikipathways:WP254)
26. • Wnt signaling pathway - Homo sapiens (human) (kegg.pathway:hsa04310)
    • Signaling by WNT (reactome:R-HSA-195721)
    • Wnt signaling pathway (wikipathways:WP363)
    • Wnt signaling pathway and pluripotency (wikipathways:WP399)
    • Wnt signaling (wikipathways:WP428)
27. • Notch signaling pathway - Homo sapiens (human) (kegg.pathway:hsa04330)
    • Signaling by NOTCH (reactome:R-HSA-157118)
    • Notch signaling (wikipathways:WP268)
    • Canonical and non-canonical Notch signaling (wikipathways:WP3845)
    • Notch signaling pathway (Netpath) (wikipathways:WP61)
28. • Hedgehog signaling pathway - Homo sapiens (human) (kegg.pathway:hsa04340)
    • Signaling by Hedgehog (reactome:R-HSA-5358351)
    • Hedgehog signaling pathway (wikipathways:WP4249)
    • Hedgehog signaling pathway Netpath (wikipathways:WP47)
29. • TGF-beta signaling pathway - Homo sapiens (human) (kegg.pathway:hsa04350)
    • Signaling by TGFB family members (reactome:R-HSA-9006936)
    • TGF-beta signaling pathway (wikipathways:WP366)
    • TGF-beta receptor signaling (wikipathways:WP560)
30. • Hippo signaling pathway - Homo sapiens (human) (kegg.pathway:hsa04390)
    • Hippo signaling pathway - multiple species - Homo sapiens (human) (kegg.pathway:hsa04392)
    • Signaling by Hippo (reactome:R-HSA-2028269)
31. • Toll-like receptor signaling pathway - Homo sapiens (human) (kegg.pathway:hsa04620)
    • Toll-like Receptor Cascades (reactome:R-HSA-168898)
    • Toll-like receptor signaling related to MyD88 (wikipathways:WP3858)
    • Toll-like receptor signaling pathway (wikipathways:WP75)
32. • tumor necrosis factor-mediated signaling pathway (go:0033209)
    • leptin-mediated signaling pathway (go:0033210)
    • adiponectin-activated signaling pathway (go:0033211)
    • Adipocytokine signaling pathway (kegg.pathway:map04920)
33. • mosaic variegated aneuploidy syndrome 1 (doid:0080141)
    • mosaic variegated aneuploidy syndrome (doid:0080688)
    • Mosaic variegated aneuploidy syndrome (mesh:C536987)
34. • congenital adrenal hyperplasia (doid:0050811)
    • Lipoid congenital adrenal hyperplasia (mesh:C537027)
    • Adrenal Hyperplasia, Congenital (mesh:D000312)
35. • pterygium (doid:0002116)
    • conjunctival pterygium (doid:10526)
    • Pterygium (mesh:D011625)
36. • marginal zone B-cell lymphoma (doid:0050748)
    • MALT lymphoma (doid:0050909)
    • Lymphoma, B-Cell, Marginal Zone (mesh:D018442)
37. • Vaccines, Inactivated (mesh:D015164)
    • killed vaccine (vo:0000017)
    • inactivated vaccine (vo:0000315)
38. • Vaccine Efficacy (mesh:D000087507)
    • vaccine efficacy (vo:0000247)
    • vaccine effectiveness (vo:0000860)
39. • Influenza Vaccines (mesh:D007252)
    • Influenza virus vaccine (vo:0000642)
    • influenza vaccines (vo:0003495)
40. • Rotavirus vaccine (drugbank:DB10276)
    • Rotavirus Vaccines (mesh:D022243)
    • Rotavirus vaccine (vo:0000658)
    • Rotarix (vo:0010738)
41. • Aryl hydrocarbon receptor signalling (reactome:R-HSA-8937144)
    • Aryl hydrocarbon receptor Netpath (wikipathways:WP2586)
    • Aryl hydrocarbon receptor pathway (wikipathways:WP2873)