This document details the invalid local unique identifiers used in CURIEs
for node, synonym, and definition cross-references in zfa. See the GitHub repository.
CARO: Common Anatomy Reference OntologyOverall, there were 3 invalid
xrefs to external prefixed with CARO (standardized to Bioregistry
prefix caro) that
did not match the standard pattern ^\d{7}$.
| external_xref | usages_count | usages |
|---|---|---|
CARO:MAH |
3 | ZFA:0001689, ZFA:0005594, ZFA:0009000 |
CL: Cell OntologyOverall, there were 172 invalid
xrefs to external prefixed with CL (standardized to Bioregistry
prefix cl) that
did not match the standard pattern ^\d{7}$.
| external_xref | usages_count | usages |
|---|---|---|
CL:curator |
160 | ZFA:0001691, ZFA:0001694, ZFA:0001725, ZFA:0005243, ZFA:0005244, … |
CL:CVS |
4 | ZFA:0009375, ZFA:0009376, ZFA:0009393, ZFA:0009395 |
CL:Curator |
2 | ZFA:0005242, ZFA:0005873 |
CL:editor |
2 | ZFA:0005769, ZFA:0009402 |
CL:tfm |
1 | ZFA:0005743 |
CL:MAH |
1 | ZFA:0005775 |
CL:dhill |
1 | ZFA:0009301 |
CL:00000365 |
1 | ZFA:0005772 |
FB: FlyBase GeneOverall, there were 1 invalid
xrefs to external prefixed with FB (standardized to Bioregistry
prefix flybase) that
did not match the standard pattern ^FB\w{2}\d{7}$.
| external_xref | usages_count | usages |
|---|---|---|
FB:ma |
1 | ZFA:0009387 |
GO: Gene OntologyOverall, there were 1 invalid
xrefs to external prefixed with GO (standardized to Bioregistry
prefix go) that
did not match the standard pattern ^\d{7}$.
| external_xref | usages_count | usages |
|---|---|---|
GO:cjm |
1 | ZFA:0009307 |
KUPO: Kidney and Urinary Pathway OntologyOverall, there were 1 invalid
xrefs to external prefixed with KUPO (standardized to Bioregistry
prefix kupo) that
did not match the standard pattern ^\d{7}$.
| external_xref | usages_count | usages |
|---|---|---|
KUPO:SJ |
1 | ZFA:0009374 |
MESH: Medical Subject HeadingsOverall, there were 1 invalid
xrefs to external prefixed with MESH (standardized to Bioregistry
prefix mesh) that
did not match the standard pattern ^(C|D)\d{6,9}$.
| external_xref | usages_count | usages |
|---|---|---|
MESH:68018069 |
1 | ZFA:0000678 |
ORCiD: Open Researcher and ContributorOverall, there were 3 invalid
xrefs to external prefixed with ORCiD (standardized to Bioregistry
prefix orcid) that
did not match the standard pattern ^\d{4}-\d{4}-\d{4}-\d{3}(\d|X)$.
| external_xref | usages_count | usages |
|---|---|---|
ORCiD:000-0002-9900-7880 |
1 | ZFA:0000833 |
ORCiD:CVS |
1 | ZFA:0001679 |
ORCiD:0000-0002-2244-7917, |
1 | ZFA:0005867 |
ORCID: Open Researcher and ContributorOverall, there were 1 invalid
xrefs to external prefixed with ORCID (standardized to Bioregistry
prefix orcid) that
did not match the standard pattern ^\d{4}-\d{4}-\d{4}-\d{3}(\d|X)$.
| external_xref | usages_count | usages |
|---|---|---|
ORCID:000-0002-2244-7917 |
1 | ZFA:0005927 |
TAO: Teleost Anatomy OntologyOverall, there were 172 invalid
xrefs to external prefixed with TAO (standardized to Bioregistry
prefix tao) that
did not match the standard pattern ^\d{7}$.
| external_xref | usages_count | usages |
|---|---|---|
TAO:curator |
157 | ZFA:0000167, ZFA:0000271, ZFA:0000508, ZFA:0000623, ZFA:0000660, … |
TAO:WD |
11 | ZFA:0000108, ZFA:0000239, ZFA:0000277, ZFA:0000407, ZFA:0000565, … |
TAO:GA_TG |
3 | ZFA:0000332, ZFA:0000583, ZFA:0000594 |
TAO:Curator |
1 | ZFA:0001589 |
UBERON: Uber Anatomy OntologyOverall, there were 2 invalid
xrefs to external prefixed with UBERON (standardized to Bioregistry
prefix uberon) that
did not match the standard pattern ^\d+$.
| external_xref | usages_count | usages |
|---|---|---|
UBERON:curator |
2 | ZFA:0000632, ZFA:0005658 |
vHOG: Vertebrate Homologous Organ Group OntologyOverall, there were 1 invalid
xrefs to external prefixed with vHOG (standardized to Bioregistry
prefix vhog) that
did not match the standard pattern ^\d{7}$.
| external_xref | usages_count | usages |
|---|---|---|
vHOG:curator |
1 | ZFA:0005314 |
ZFIN: Zebrafish Information Network GeneOverall, there were 5 invalid
xrefs to external prefixed with ZFIN (standardized to Bioregistry
prefix zfin) that
did not match the standard pattern ^ZDB\-\w+\-\d+\-\d+$.
| external_xref | usages_count | usages |
|---|---|---|
ZFIN:ZDB-PUB-171118-8v |
1 | ZFA:0000704 |
ZFIN:ZDB-PUB-120419-3. |
1 | ZFA:0005877 |
ZFIN:ZDB-PUB-050623-3. |
1 | ZFA:0001249 |
ZFIN:ZDB-PUB-961014-192. |
1 | ZFA:0001595 |
ZFIN:ZDB-PUB-050120-6. |
1 | ZFA:0005737 |