This document details the invalid local unique identifiers used in CURIEs
for node, synonym, and definition cross-references in xao. See the GitHub repository.
CARO: Common Anatomy Reference OntologyOverall, there were 4 invalid
xrefs to external prefixed with CARO (standardized to Bioregistry
prefix caro) that
did not match the standard pattern ^\d{7}$.
| external_xref | usages_count | usages |
|---|---|---|
CARO:MAH |
4 | XAO:0004007, XAO:0004008, XAO:0004009, XAO:0004010 |
NCIt: NCI ThesaurusOverall, there were 16 invalid
xrefs to external prefixed with NCIt (standardized to Bioregistry
prefix ncit) that
did not match the standard pattern ^[CRPA]\d+$.
| external_xref | usages_count | usages |
|---|---|---|
NCIt:Peripheral_Nerve |
1 | XAO:0000204 |
NCIt:Dorsal |
1 | XAO:0000298 |
NCIt:Ventral |
1 | XAO:0000299 |
NCIt:Deep |
1 | XAO:0000301 |
NCIt:Lateral |
1 | XAO:0000304 |
NCIt:Anterior |
1 | XAO:0003056 |
NCIt:Posterior |
1 | XAO:0003057 |
NCIt:Spermatid |
1 | XAO:0003151 |
NCIt:Medial |
1 | XAO:0003187 |
NCIt:Proximal |
1 | XAO:0003188 |
NCIt:Distal |
1 | XAO:0003189 |
NCIt:Inner_Limiting_Membrane |
1 | XAO:0003222 |
NCIt:Outer_Limiting_Membrane |
1 | XAO:0003224 |
NCIt:Left |
1 | XAO:0005005 |
NCIt:Right |
1 | XAO:0005006 |
NCIt:Abdominal_Wall |
1 | XAO:0005504 |
VSAO: Vertebrate Skeletal Anatomy OntologyOverall, there were 1 invalid
xrefs to external prefixed with VSAO (standardized to Bioregistry
prefix vsao) that
did not match the standard pattern ^\d{7}$.
| external_xref | usages_count | usages |
|---|---|---|
VSAO:00000082 |
1 | XAO:0004023 |
XAO: Xenopus Anatomy OntologyOverall, there were 5 invalid
xrefs to external prefixed with XAO (standardized to Bioregistry
prefix xao) that
did not match the standard pattern ^\d{7}$.
| external_xref | usages_count | usages |
|---|---|---|
XAO:curator |
5 | XAO:0000202, XAO:0000280, XAO:0003228, XAO:0004088, XAO:0004113 |
Xenbase: XenbaseOverall, there were 240 invalid
xrefs to external prefixed with Xenbase (standardized to Bioregistry
prefix xenbase) that
did not match the standard pattern ^XB\-\w+\-\d+$.
| external_xref | usages_count | usages |
|---|---|---|
Xenbase:Staff |
221 | XAO:0000013, XAO:0000029, XAO:0000030, XAO:0000032, XAO:0000034, … |
Xenbase:KAB |
19 | XAO:0004389, XAO:0004525, XAO:0004526, XAO:0004527, XAO:0004533, … |