This document details the invalid local unique identifiers used in CURIEs
for node, synonym, and definition cross-references in vsmo.
BFO: Basic Formal OntologyOverall, there were 6 invalid
xrefs to external prefixed with BFO (standardized to Bioregistry
prefix bfo) that
did not match the standard pattern ^\d{7}$.
| external_xref | usages_count | usages |
|---|---|---|
BFO:snap:Object |
1 | snap:Object |
BFO:snap:ObjectAggregate |
1 | snap:ObjectAggregate |
BFO:snap:Quality |
1 | snap:Quality |
BFO:snap:Role |
1 | snap:Role |
BFO:span:Process |
1 | span:Process |
BFO:span:TemporalRegion |
1 | span:TemporalRegion |
CAS: CAS Registry NumberOverall, there were 1 invalid
xrefs to external prefixed with CAS (standardized to Bioregistry
prefix cas) that
did not match the standard pattern ^\d{1,7}\-\d{2}\-\d$.
| external_xref | usages_count | usages |
|---|---|---|
CAS:7-(2-chlorophenyl)-4-ethoxy-3,5-dioxa-6-aza-4-phosphaoct-6-ene-8-nitrile4-sulfide |
1 | MIRO:10000108 |
ChEBI: Chemical Entities of Biological InterestOverall, there were 1 invalid
xrefs to external prefixed with ChEBI (standardized to Bioregistry
prefix chebi) that
did not match the standard pattern ^\d+$.
| external_xref | usages_count | usages |
|---|---|---|
ChEBI: |
1 | CHEBI:23092 |
DOID: Human Disease OntologyOverall, there were 1 invalid
xrefs to external prefixed with DOID (standardized to Bioregistry
prefix doid) that
did not match the standard pattern ^\d+$.
| external_xref | usages_count | usages |
|---|---|---|
DOID: 2293 |
1 | VSMO:0000055 |
ISBN: International Standard Book NumberOverall, there were 110 invalid
xrefs to external prefixed with ISBN (standardized to Bioregistry
prefix isbn) that
did not match the standard pattern ^(ISBN)?(-13|-10)?[:]?[ ]?(\d{2,3}[ -]?)?\d{1,5}[ -]?\d{1,7}[ -]?\d{1,6}[ -]?(\d|X)$.
| external_xref | usages_count | usages |
|---|---|---|
ISBN:1555812384: |
110 | VSMO:0000529, VSMO:0000546, VSMO:0000578, VSMO:0000579, VSMO:0000580, … |
OBI: Ontology for Biomedical InvestigationsOverall, there were 2 invalid
xrefs to external prefixed with OBI (standardized to Bioregistry
prefix obi) that
did not match the standard pattern ^\d{7}$.
| external_xref | usages_count | usages |
|---|---|---|
OBI:authors |
2 | OBI:0000415, OBI:0000659 |
VO: Vaccine OntologyOverall, there were 2 invalid
xrefs to external prefixed with VO (standardized to Bioregistry
prefix vo) that
did not match the standard pattern ^\d{7}$.
| external_xref | usages_count | usages |
|---|---|---|
VO:Authors |
2 | VO:0000002, VO:0003021 |