This document details the invalid local unique identifiers used in CURIEs
for node, synonym, and definition cross-references in vario.
MI: Molecular Interactions Controlled VocabularyOverall, there were 1 invalid
xrefs to external prefixed with MI (standardized to Bioregistry
prefix mi) that
did not match the standard pattern ^\d{4}$.
| external_xref | usages_count | usages |
|---|---|---|
MI:0000704 |
1 | VariO:0272 |
SGD: Saccharomyces Genome DatabaseOverall, there were 2 invalid
xrefs to external prefixed with SGD (standardized to Bioregistry
prefix sgd) that
did not match the standard pattern ^((S\d+$)|(Y[A-Z]{2}\d{3}[a-zA-Z](\-[A-Z])?))$.
| external_xref | usages_count | usages |
|---|---|---|
SGD:curators |
2 | VariO:0290, VariO:0291 |
SO: Sequence types and features ontologyOverall, there were 1 invalid
xrefs to external prefixed with SO (standardized to Bioregistry
prefix so) that
did not match the standard pattern ^\d{7}$.
| external_xref | usages_count | usages |
|---|---|---|
SO:ke |
1 | VariO:0196 |
UniProt: UniProt ProteinOverall, there were 1 invalid
xrefs to external prefixed with UniProt (standardized to Bioregistry
prefix uniprot) that
did not match the standard pattern ^([A-N,R-Z][0-9]([A-Z][A-Z, 0-9][A-Z, 0-9][0-9]){1,2})|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])(\.\d+)?$.
| external_xref | usages_count | usages |
|---|---|---|
UniProt:curation_manual |
1 | VariO:0281 |
VariO: Variation OntologyOverall, there were 410 invalid
xrefs to external prefixed with VariO (standardized to Bioregistry
prefix vario) that
did not match the standard pattern ^\d+$.
| external_xref | usages_count | usages |
|---|---|---|
VariO:mv |
410 | VariO:0001, VariO:0002, VariO:0003, VariO:0004, VariO:0005, … |
Vario: Variation OntologyOverall, there were 1 invalid
xrefs to external prefixed with Vario (standardized to Bioregistry
prefix vario) that
did not match the standard pattern ^\d+$.
| external_xref | usages_count | usages |
|---|---|---|
Vario:mv |
1 | VariO:0017 |