oquat

uberon

This document details the invalid local unique identifiers used in CURIEs for node, synonym, and definition cross-references in uberon. See the GitHub repository.

AAO: Amphibian gross anatomy

Overall, there were 535 invalid xrefs to external prefixed with AAO (standardized to Bioregistry prefix aao) that did not match the standard pattern ^\d{7}$.

external_xref usages_count usages
AAO:LAP 251 UBERON:0001080, UBERON:0002375, UBERON:0012129, UBERON:0014898, UBERON:0034900, …
AAO:EJS 116 UBERON:0013732, UBERON:3000237, UBERON:3000265, UBERON:3000288, UBERON:3000323, …
AAO:BJB 59 UBERON:3000041, UBERON:3000044, UBERON:3010029, UBERON:3010039, UBERON:3010042, …
AAO:BMZ 30 UBERON:3010586, UBERON:3010589, UBERON:3010590, UBERON:3010613, UBERON:3010614, …
AAO:MEJ 17 UBERON:3010673, UBERON:3010691, UBERON:3010692, UBERON:3010694, UBERON:3010695, …
AAO:Trueb_1973 8 UBERON:3000711, UBERON:3000712, UBERON:3000717, UBERON:3000793, UBERON:3000794, …
AAO:SIQ 8 UBERON:3010105, UBERON:3010765, UBERON:3010778, UBERON:3010796, UBERON:3010798, …
AAO:Francis_1934 6 UBERON:3000694, UBERON:3000950, UBERON:3000951, UBERON:3000952, UBERON:3000954, …
AAO:Pugener_2002 5 UBERON:3000711, UBERON:3000712, UBERON:3000717, UBERON:3000727, UBERON:3000735
AAO:Maglia_et_al_2007 4 UBERON:0006714, UBERON:0006715, UBERON:3000746, UBERON:3000810
AAO:CAM 4 UBERON:3010720, UBERON:3010722, UBERON:3010751, UBERON:3010764
AAO:Pugener_and_Maglia_2008 3 UBERON:0001079, UBERON:0006062, UBERON:3000745
AAO:Duellman_and_Trueb_1994 3 UBERON:3000707, UBERON:3000728, UBERON:3000956
AAO:Griffiths_1959 3 UBERON:3000718, UBERON:3000719, UBERON:3000720
AAO:DSM 2 UBERON:0009121, UBERON:3010632
AAO:LT 2 UBERON:3000074, UBERON:3010576
AAO:curator 2 UBERON:3000588, UBERON:3010138
AAO:Rocek_2003 2 UBERON:3000683, UBERON:3000685
AAO:Kluge_and_Farris_1969 2 UBERON:3000713, UBERON:3000714
AAO:Cannatella_1985 2 UBERON:3000808, UBERON:3000809
AAO:DBW 2 UBERON:3010583, UBERON:3010728
AAO:JMG 2 UBERON:3010818, UBERON:3010819
AAO:HM 1 UBERON:3010690
AAO:AMM 1 UBERON:3010821

AEO: Anatomical Entity Ontology

Overall, there were 31 invalid xrefs to external prefixed with AEO (standardized to Bioregistry prefix aeo) that did not match the standard pattern ^\d{7}$.

external_xref usages_count usages
AEO:JB 30 UBERON:0001637, UBERON:0004016, UBERON:0005866, UBERON:0006846, UBERON:0007473, …
AEO:000020 1 UBERON:0001013

BIRNLEX: Biomedical Informatics Research Network Lexicon

Overall, there were 2 invalid xrefs to external prefixed with BIRNLEX (standardized to Bioregistry prefix birnlex) that did not match the standard pattern ^\d+$.

external_xref usages_count usages
BIRNLEX:Limbic_system 1 UBERON:0000349
BIRNLEX:4106_2 1 UBERON:0000396

CALOHA: CALIPHO Group Ontology of Human Anatomy

Overall, there were 3 invalid xrefs to external prefixed with CALOHA (standardized to Bioregistry prefix caloha) that did not match the standard pattern ^TS-\d+$.

external_xref usages_count usages
CALOHA:paula 3 UBERON:0007808, UBERON:0014454, UBERON:0014455

CARO: Common Anatomy Reference Ontology

Overall, there were 4 invalid xrefs to external prefixed with CARO (standardized to Bioregistry prefix caro) that did not match the standard pattern ^\d{7}$.

external_xref usages_count usages
CARO:DOS 4 UBERON:0000026, UBERON:0000475, UBERON:0000478, UBERON:0022295

CL: Cell Ontology

Overall, there were 19 invalid xrefs to external prefixed with CL (standardized to Bioregistry prefix cl) that did not match the standard pattern ^\d{7}$.

external_xref usages_count usages
CL:tm 19 UBERON:0001249, UBERON:0001249, UBERON:0001745, UBERON:0004041, UBERON:0004042, …

DHBA: Developing Human Brain Atlas

Overall, there were 17 invalid xrefs to external prefixed with DHBA (standardized to Bioregistry prefix dhba) that did not match the standard pattern ^\d+$.

external_xref usages_count usages
DHBA:HNM 1 UBERON:0001892
DHBA:GiRt 1 UBERON:0002155
DHBA:ILN 1 UBERON:0002733
DHBA:10N 1 UBERON:0002870
DHBA:AILN 1 UBERON:0002965
DHBA:SZ 1 UBERON:0004023
DHBA:CbV 1 UBERON:0004079
DHBA:CbVI 1 UBERON:0004080
DHBA:CbVIIb 1 UBERON:0005346
DHBA:CbVIIIb 1 UBERON:0005349
DHBA:HN 1 UBERON:0008993
DHBA:HGM 1 UBERON:0019263
DHBA:PILN 1 UBERON:0019295
DHBA:SHy 1 UBERON:0019308
DHBA:FIFT 1 UBERON:0022247
DHBA:cpn 1 UBERON:0022271
DHBA:cbu-h 1 UBERON:0022272

DMBA: Developing Mouse Brain Atlas

Overall, there were 16 invalid xrefs to external prefixed with DMBA (standardized to Bioregistry prefix dmba) that did not match the standard pattern ^\d+$.

external_xref usages_count usages
DMBA:CbHCx 1 UBERON:0002129
DMBA:Mam 1 UBERON:0002206
DMBA:dpy 1 UBERON:0002755
DMBA:OB 1 UBERON:0004186
DMBA:DTTh 1 UBERON:0004703
DMBA:OB-Opl 1 UBERON:0005376
DMBA:AGlom 1 UBERON:0007631
DMBA:Bar 1 UBERON:0007632
DMBA:tracts 1 UBERON:0007702
DMBA:AGr 1 UBERON:0015244
DMBA:m2 1 UBERON:0019274
DMBA:r9 1 UBERON:0019284
DMBA:r10 1 UBERON:0019285
DMBA:r11 1 UBERON:0019286
DMBA:AOPl 1 UBERON:0019289
DMBA:AIPl 1 UBERON:0019290

EMAPA: Mouse Developmental Anatomy Ontology

Overall, there were 1 invalid xrefs to external prefixed with EMAPA (standardized to Bioregistry prefix emapa) that did not match the standard pattern ^\d+$.

external_xref usages_count usages
EMAPA:th 1 UBERON:0001638

FB: FlyBase Gene

Overall, there were 8 invalid xrefs to external prefixed with FB (standardized to Bioregistry prefix flybase) that did not match the standard pattern ^FB\w{2}\d{7}$.

external_xref usages_count usages
FB:gg 7 UBERON:0000018, UBERON:0000914, UBERON:0000918, UBERON:0000972, UBERON:0000984, …
FB:DJS 1 UBERON:0001048

FlyBase: FlyBase Gene

Overall, there were 1 invalid xrefs to external prefixed with FlyBase (standardized to Bioregistry prefix flybase) that did not match the standard pattern ^FB\w{2}\d{7}$.

external_xref usages_count usages
FlyBase:FBim0000836.html 1 UBERON:6004646

FMA: Foundational Model of Anatomy

Overall, there were 1,055 invalid xrefs to external prefixed with FMA (standardized to Bioregistry prefix fma) that did not match the standard pattern ^\d+$.

external_xref usages_count usages
FMA:TA 1022 UBERON:0000002, UBERON:0000010, UBERON:0000011, UBERON:0000013, UBERON:0000019, …
FMA:FMA 27 UBERON:0000485, UBERON:0000486, UBERON:0001845, UBERON:0001943, UBERON:0002137, …
FMA:CMA 6 UBERON:0002022, UBERON:0002657, UBERON:0002740, UBERON:0002756, UBERON:0016636, …

GO: Gene Ontology

Overall, there were 4 invalid xrefs to external prefixed with GO (standardized to Bioregistry prefix go) that did not match the standard pattern ^\d{7}$.

external_xref usages_count usages
GO:GO 2 UBERON:0000016, UBERON:0006003
GO:dph 1 UBERON:0000089
GO:curator 1 UBERON:0005863

HBA: Human Brain Atlas

Overall, there were 17 invalid xrefs to external prefixed with HBA (standardized to Bioregistry prefix hba) that did not match the standard pattern ^\d+$.

external_xref usages_count usages
HBA:GiRt 1 UBERON:0002155
HBA:DTL 1 UBERON:0002736
HBA:ILr 1 UBERON:0002965
HBA:DTLd 1 UBERON:0002984
HBA:TELWM 1 UBERON:0011299
HBA:FLs 1 UBERON:0014639
HBA:TLs 1 UBERON:0014687
HBA:MESWM 1 UBERON:0016554
HBA:MYWM 1 UBERON:0019262
HBA:PoWM 1 UBERON:0019293
HBA:TELCom 1 UBERON:0019294
HBA:ILc 1 UBERON:0019295
HBA:SolVL 1 UBERON:0019312
HBA:AOrG 1 UBERON:0022244
HBA:EL 1 UBERON:0022258
HBA:PLT 1 UBERON:0022268
HBA:cpn 1 UBERON:0022271

HPO: Human Phenotype Ontology

Overall, there were 5 invalid xrefs to external prefixed with HPO (standardized to Bioregistry prefix hp) that did not match the standard pattern ^\d{7}$.

external_xref usages_count usages
HPO:curators 2 UBERON:0014386, UBERON:0034908
HPO:pr 2 UBERON:0001750, UBERON:0035639
HPO:probinson 1 UBERON:0017732

ISBN: International Standard Book Number

Overall, there were 1 invalid xrefs to external prefixed with ISBN (standardized to Bioregistry prefix isbn) that did not match the standard pattern ^(ISBN)?(-13|-10)?[:]?[ ]?(\d{2,3}[ -]?)?\d{1,5}[ -]?\d{1,7}[ -]?\d{1,6}[ -]?(\d|X)$.

external_xref usages_count usages
ISBN:9004086161,9789004086166 1 UBERON:7500120

MA: Mouse adult gross anatomy

Overall, there were 16 invalid xrefs to external prefixed with MA (standardized to Bioregistry prefix ma) that did not match the standard pattern ^\d+$.

external_xref usages_count usages
MA:th 16 UBERON:0000983, UBERON:0002470, UBERON:0002471, UBERON:0002472, UBERON:0003282, …

MESH: Medical Subject Headings

Overall, there were 168 invalid xrefs to external prefixed with MESH (standardized to Bioregistry prefix mesh) that did not match the standard pattern ^(C|D)\d{6,9}$.

external_xref usages_count usages
MESH:A10.165.265.507 3 UBERON:0014730, UBERON:0014730, UBERON:0014731
MESH:A09.246.631.909.625.125 2 UBERON:0000054, UBERON:0000054
MESH:A04.531.621.578 2 UBERON:0001764, UBERON:0001764
MESH:A02.835.232.500.247.343 2 UBERON:0006767, UBERON:0006767
MESH:A12.200.946 2 UBERON:0007108, UBERON:0007108
MESH:A13.869.524 2 UBERON:0007362, UBERON:0007362
MESH:D24.185.926.580.590 2 UBERON:0008274, UBERON:0008274
MESH:D24.185.926.580.230 2 UBERON:0008280, UBERON:0008280
MESH:A13.660 2 UBERON:0010207, UBERON:0010207
MESH:A09.246.631.246.280 2 UBERON:0011060, UBERON:0011060
MESH:A06.224.736 2 UBERON:0012279, UBERON:0012279
MESH:A02.513.170 2 UBERON:0012332, UBERON:0012332
MESH:A08.800.550 2 UBERON:0012453, UBERON:0012453
MESH:D24.185.965.850.325 2 UBERON:0013106, UBERON:0013106
MESH:D24.185.965.850.480 2 UBERON:0013110, UBERON:0013110
MESH:D24.185.965.850.960 2 UBERON:0013112, UBERON:0013112
MESH:A08.186.211.577.699 2 UBERON:0013201, UBERON:0013201
MESH:A08.186.211.132.810.428.200.462 2 UBERON:0014908, UBERON:0014908
MESH:G06.535.805 2 UBERON:0018229, UBERON:0018229
MESH:A08.612.600 2 UBERON:0034931, UBERON:0034931
MESH:A08.800.550.700.840 2 UBERON:0035018, UBERON:0035018
MESH:A08.800.050.800.900.700 2 UBERON:0004019, UBERON:0018392
MESH:A03.734.414 1 UBERON:0000006
MESH:A09.371.729.522 1 UBERON:0000053
MESH:A01.456.810 1 UBERON:0000403
MESH:A08.186.211.730.385.800.240 1 UBERON:0000432
MESH:A07.541.510 1 UBERON:0000946
MESH:A07.231.114.056 1 UBERON:0000947
MESH:A09.371.060.217 1 UBERON:0000964
MESH:A10.165.114 1 UBERON:0001013
MESH:A13.641 1 UBERON:0001058
MESH:A02.633.567.900.500 1 UBERON:0001111
MESH:A07.231.114.565.755 1 UBERON:0001182
MESH:A10.549.600 1 UBERON:0001211
MESH:A06.407.071.265 1 UBERON:0001236
MESH:A05.360.319.679.490 1 UBERON:0001295
MESH:A02.633.570.500 1 UBERON:0001296
MESH:A02.835.232.251 1 UBERON:0001437
MESH:A02.835.583.378.062 1 UBERON:0001488
MESH:A04.531.621.827 1 UBERON:0001724
MESH:A09.371.060.067 1 UBERON:0001766
MESH:A09.371.060.217.325 1 UBERON:0001772
MESH:A09.371.060.217.228 1 UBERON:0001777
MESH:A08.800.800.720 1 UBERON:0001780
MESH:A09.371.060 1 UBERON:0001801
MESH:A09.371.060.200 1 UBERON:0001811
MESH:A12.200.194 1 UBERON:0001914
MESH:A07.231.432.952 1 UBERON:0001979
MESH:A10.272.491 1 UBERON:0001986
MESH:A08.186.211.132.810.428.200 1 UBERON:0002037
MESH:A06.407.071.140.960 1 UBERON:0002053
MESH:A06.407.071.140.950 1 UBERON:0002054
MESH:A06.407.071.140.970 1 UBERON:0002055
MESH:A07.541.459 1 UBERON:0002099
MESH:A08.186.211.132.810.406.286 1 UBERON:0002162
MESH:A08.186.854.610.800 1 UBERON:0002181
MESH:A04.411.125 1 UBERON:0002185
MESH:A07.231.114.681 1 UBERON:0002250
MESH:A12.200.147 1 UBERON:0002297
MESH:A05.810.453.736.520.380 1 UBERON:0002320
MESH:A08.340.315.350.800 1 UBERON:0002441
MESH:A08.186.211.730.317.357.342.063 1 UBERON:0002634
MESH:A08.186.211.730.385.357.362 1 UBERON:0002770
MESH:A10.615.284.473 1 UBERON:0003124
MESH:A02.513.514.475 1 UBERON:0003676
MESH:A02.633.567.600 1 UBERON:0003681
MESH:A02.633.567.750 1 UBERON:0003682
MESH:A01.047.412 1 UBERON:0003702
MESH:A03.159.183.079 1 UBERON:0003703
MESH:A03.159.183.158 1 UBERON:0003704
MESH:A07.231.836 1 UBERON:0003710
MESH:A01.456.830.165 1 UBERON:0003722
MESH:A08.800.800.720.800 1 UBERON:0003726
MESH:A04.760 1 UBERON:0004785
MESH:A05.360.444.849 1 UBERON:0005212
MESH:A04.531.520.573 1 UBERON:0005386
MESH:A07.541.278.395 1 UBERON:0005440
MESH:A07.231.114.565 1 UBERON:0005616
MESH:A07.231.908.670.385 1 UBERON:0005617
MESH:A12.207 1 UBERON:0006314
MESH:A05.810.453.537.503 1 UBERON:0006517
MESH:A02.633.567.700 1 UBERON:0006531
MESH:A02.513.803 1 UBERON:0006589
MESH:A12.200.935 1 UBERON:0007113
MESH:A14.254.245 1 UBERON:0007116
MESH:A01.047.849 1 UBERON:0007118
MESH:A13.869.106 1 UBERON:0007358
MESH:A13.869.697 1 UBERON:0007361
MESH:A13.869.804 1 UBERON:0007365
MESH:A07.231.114.895 1 UBERON:0007610
MESH:A14.254.237 1 UBERON:0007774
MESH:A14.254.860.715 1 UBERON:0007776
MESH:A12.383 1 UBERON:0007780
MESH:A12.207.119 1 UBERON:0007795
MESH:A14.254.229 1 UBERON:0007799
MESH:A09.246.631.663 1 UBERON:0007833
MESH:A01.456.505.580 1 UBERON:0008200
MESH:A01.047.365 1 UBERON:0008337
MESH:A02.633.567.825 1 UBERON:0008450
MESH:A01.456.830.200 1 UBERON:0008788
MESH:A08.186.211.730.885.213.670.675 1 UBERON:0008930
MESH:A08.800.800.720.725 1 UBERON:0009623
MESH:A14.254.860.700.500 1 UBERON:0009977
MESH:A07.231.432 1 UBERON:0010523
MESH:A08.663.542.100 1 UBERON:0011924
MESH:A08.663.542.122 1 UBERON:0011925
MESH:D24.185.965.850 1 UBERON:0013076
MESH:A08.800.550.700.120.600.350 1 UBERON:0034972
MESH:A08.800.550.700.120.600 1 UBERON:0034979
MESH:A16.254.500 1 UBERON:0000080
MESH:A01.378.610 1 UBERON:0000978
MESH:A03.734.667 1 UBERON:0001064
MESH:A02.835.232.834 1 UBERON:0001130
MESH:A05.360.319.779.479 1 UBERON:0001346
MESH:A01.378.800 1 UBERON:0001460
MESH:A14.254.646 1 UBERON:0001758
MESH:A08.800.800.120.680.660 1 UBERON:0001783
MESH:A08.800.050.050.150 1 UBERON:0002010
MESH:A02.835.232 1 UBERON:0002481
MESH:A09.246.631.909.625 1 UBERON:0002518
MESH:A08.186.211.730.385.357.352 1 UBERON:0002555
MESH:A07.231.114.891 1 UBERON:0003473
MESH:A04.329.364.737 1 UBERON:0003706
MESH:A01.378.610.500 1 UBERON:0003823
MESH:A09.371.894.223.250 1 UBERON:0003957
MESH:A05.810.453.736.560.570 1 UBERON:0004134
MESH:A12.207.571 1 UBERON:0006586
MESH:A09.246.631.246.930 1 UBERON:0006724
MESH:A16.254.891 1 UBERON:0007105
MESH:A16.254.403.473.200 1 UBERON:0007106
MESH:A01.047.025.600.225 1 UBERON:0007111
MESH:A09.371.670 1 UBERON:0007625
MESH:A03.365.414 1 UBERON:0007650
MESH:A02.835.583.378.900 1 UBERON:0007721
MESH:A02.835.583.378.831 1 UBERON:0008447
MESH:A06.407.747.357 1 UBERON:0009976
MESH:A06.224 1 UBERON:0010074
MESH:A08.663.542.075.800 1 UBERON:0011926
MESH:A12.207.152.200 1 UBERON:0012168
MESH:A13.734 1 UBERON:0012281
MESH:A08.800.800.720.725.150 1 UBERON:0012337
MESH:A11.284.180.565 1 UBERON:0012423
MESH:A08.800.550.700 1 UBERON:0012451
MESH:A13.970 1 UBERON:0013196
MESH:E05.256 1 UBERON:0013487

MGI: Mouse Genome Informatics

Overall, there were 262 invalid xrefs to external prefixed with MGI (standardized to Bioregistry prefix mgi) that did not match the standard pattern ^\d+$.

external_xref usages_count usages
MGI:anna 104 UBERON:0000057, UBERON:0000076, UBERON:0000114, UBERON:0000325, UBERON:0000453, …
MGI:csmith 73 UBERON:0000305, UBERON:0000995, UBERON:0001063, UBERON:0001078, UBERON:0001111, …
MGI:cwg 25 UBERON:0001013, UBERON:0001542, UBERON:0001543, UBERON:0001728, UBERON:0001729, …
MGI:smb 24 UBERON:0000362, UBERON:0000396, UBERON:0001295, UBERON:0001348, UBERON:0001772, …
MGI:llw2 11 UBERON:0000388, UBERON:0000959, UBERON:0001235, UBERON:0001236, UBERON:0001451, …
MGI:cs 8 UBERON:0018242, UBERON:0034932, UBERON:0035617, UBERON:0035618, UBERON:0035619, …
MGI:pvb 5 UBERON:0000087, UBERON:0001000, UBERON:0001230, UBERON:0001301, UBERON:0005623
MGI:rbabiuk 3 UBERON:0001213, UBERON:0010412, UBERON:0014396
MGI:monikat 3 UBERON:0002115, UBERON:0002493, UBERON:0002511
MGI:hdene 2 UBERON:0001439, UBERON:0001832
MGI:brs 1 UBERON:0001296
MGI:Anna 1 UBERON:0005203
MGI:smith 1 UBERON:0035941
MGI:sbello 1 UBERON:0036145

MP: Mammalian Phenotype Ontology

Overall, there were 37 invalid xrefs to external prefixed with MP (standardized to Bioregistry prefix mp) that did not match the standard pattern ^\d{7}$.

external_xref usages_count usages
MP:anna 19 UBERON:0001258, UBERON:0001338, UBERON:0002068, UBERON:0002366, UBERON:0002366, …
MP:MP 17 UBERON:0000173, UBERON:0001259, UBERON:0001947, UBERON:0005452, UBERON:0008835, …
MP:000999 1 UBERON:0035922

NCIT: NCI Thesaurus

Overall, there were 1 invalid xrefs to external prefixed with NCIT (standardized to Bioregistry prefix ncit) that did not match the standard pattern ^C\d+$.

external_xref usages_count usages
NCIT:NCIT 1 UBERON:0010499

ncithesaurus: NCI Thesaurus

Overall, there were 230 invalid xrefs to external prefixed with ncithesaurus (standardized to Bioregistry prefix ncit) that did not match the standard pattern ^C\d+$.

external_xref usages_count usages
ncithesaurus:Corona_Dentis 2 UBERON:0003675, UBERON:0003675
ncithesaurus:Shell 2 UBERON:0006612, UBERON:0006612
ncithesaurus:Gland_of_the_Third_Eyelid 2 UBERON:0013230, UBERON:0013230
ncithesaurus:Cerebral_Subcortex 1 UBERON:0000454
ncithesaurus:Ileal_Vein 1 UBERON:0001217
ncithesaurus:Median_Basilic_Vein 1 UBERON:0001414
ncithesaurus:Pectoralis_Muscle 1 UBERON:0001495
ncithesaurus:Submental_Vein 1 UBERON:0001655
ncithesaurus:Deep_Temporal_Vein 1 UBERON:0001661
ncithesaurus:Nucleus_of_Diagonal_Band 1 UBERON:0001879
ncithesaurus:Papillary_Dermis 1 UBERON:0001992
ncithesaurus:Thymic_Lobule 1 UBERON:0002125
ncithesaurus:Endometrial_Stroma 1 UBERON:0002337
ncithesaurus:Sacral_Lymph_Node 1 UBERON:0002528
ncithesaurus:Anterior_Cruciate_Ligament 1 UBERON:0003671
ncithesaurus:Floor_of_the_Mouth 1 UBERON:0003679
ncithesaurus:Omentum 1 UBERON:0003688
ncithesaurus:Abdominal_Wall 1 UBERON:0003697
ncithesaurus:Splenic_Vein 1 UBERON:0003713
ncithesaurus:CA4_Field_of_the_Cornu_Ammonis 1 UBERON:0003884
ncithesaurus:Cortical_Cell_Layer_of_the_Cerebellum 1 UBERON:0004130
ncithesaurus:Bowman_s_Membrane 1 UBERON:0004370
ncithesaurus:Gastric_Vein 1 UBERON:0004450
ncithesaurus:Digital_Vein 1 UBERON:0004562
ncithesaurus:Rib_3 1 UBERON:0004603
ncithesaurus:Rib_4 1 UBERON:0004604
ncithesaurus:Rib_5 1 UBERON:0004605
ncithesaurus:Rib_6 1 UBERON:0004606
ncithesaurus:Rib_7 1 UBERON:0004607
ncithesaurus:Rib_9 1 UBERON:0004608
ncithesaurus:C3_Vertebra 1 UBERON:0004612
ncithesaurus:C4_Vertebra 1 UBERON:0004613
ncithesaurus:C5_Vertebra 1 UBERON:0004614
ncithesaurus:C6_Vertebra 1 UBERON:0004615
ncithesaurus:L1_Vertebra 1 UBERON:0004617
ncithesaurus:L2_Vertebra 1 UBERON:0004618
ncithesaurus:L3_Vertebra 1 UBERON:0004619
ncithesaurus:L4_Vertebra 1 UBERON:0004620
ncithesaurus:L5_Vertebra 1 UBERON:0004621
ncithesaurus:T1_Vertebra 1 UBERON:0004626
ncithesaurus:T2_Vertebra 1 UBERON:0004627
ncithesaurus:T3_Vertebra 1 UBERON:0004628
ncithesaurus:T4_Vertebra 1 UBERON:0004629
ncithesaurus:T5_Vertebra 1 UBERON:0004630
ncithesaurus:T6_Vertebra 1 UBERON:0004631
ncithesaurus:T7_Vertebra 1 UBERON:0004632
ncithesaurus:T9_Vertebra 1 UBERON:0004633
ncithesaurus:T10_Vertebra 1 UBERON:0004634
ncithesaurus:T11_Vertebra 1 UBERON:0004635
ncithesaurus:T12_Vertebra 1 UBERON:0004636
ncithesaurus:Pancreatico-Duodenal_Vein 1 UBERON:0004690
ncithesaurus:Iliac_Vein 1 UBERON:0005610
ncithesaurus:Aortic_Segment 1 UBERON:0005800
ncithesaurus:Myelinated_Nerve_Fiber 1 UBERON:0006135
ncithesaurus:Communicating_Artery 1 UBERON:0006347
ncithesaurus:Epigastric_Artery 1 UBERON:0006349
ncithesaurus:Tooth_Cusp 1 UBERON:0006844
ncithesaurus:Inferior_Thyroid_Artery 1 UBERON:0007149
ncithesaurus:Inferior_Sagittal_Sinus 1 UBERON:0007152
ncithesaurus:Deep_Epigastric_Vein 1 UBERON:0007154
ncithesaurus:Footpad 1 UBERON:0008838
ncithesaurus:Lung_Lower_Lobe 1 UBERON:0008949
ncithesaurus:Circumflex_Iliac_Artery 1 UBERON:0009026
ncithesaurus:Anal_Membrane 1 UBERON:0009195
ncithesaurus:Alveolar_Artery 1 UBERON:0009654
ncithesaurus:Auricular_Artery 1 UBERON:0009655
ncithesaurus:Spermatic_Artery 1 UBERON:0009659
ncithesaurus:Anterior_Inferior_Cerebellar_Artery 1 UBERON:0009689
ncithesaurus:Lobe 1 UBERON:0009912
ncithesaurus:Pulmonary_Lobule 1 UBERON:0010368
ncithesaurus:Parametrium 1 UBERON:0010391
ncithesaurus:Meningeal_Layer_of_the_Dura_Mater 1 UBERON:0010506
ncithesaurus:Rib_8 1 UBERON:0010757
ncithesaurus:T8_Vertebra 1 UBERON:0011050
ncithesaurus:Inferior_Pancreatico-Duodenal_Vein 1 UBERON:0011383
ncithesaurus:Growing_Follicle 1 UBERON:0012186
ncithesaurus:Phrenic_Vein 1 UBERON:0012193
ncithesaurus:Endocervical_Glandular_Epithelium 1 UBERON:0012252
ncithesaurus:Nasal-Associated_Lymphoid_Tissue 1 UBERON:0012330
ncithesaurus:Retromolar_Trigone 1 UBERON:0012376
ncithesaurus:Systemic_Vein 1 UBERON:0013140
ncithesaurus:Choroidal_Artery 1 UBERON:0013151
ncithesaurus:Anterior_Wall_of_the_Tympanum 1 UBERON:0013173
ncithesaurus:Accessory_Lacrimal_Gland 1 UBERON:0013226
ncithesaurus:Upper_Third_of_the_Esophagus 1 UBERON:0013472
ncithesaurus:Lower_Third_of_the_Esophagus 1 UBERON:0013473
ncithesaurus:Middle_Third_of_the_Esophagus 1 UBERON:0013474
ncithesaurus:Epidermal_Ridges 1 UBERON:0013487
ncithesaurus:Lateral_Lobe_of_the_Prostate 1 UBERON:0013637
ncithesaurus:Temporal_Sulcus 1 UBERON:0014687
ncithesaurus:Middle_Temporal_Sulcus 1 UBERON:0014689
ncithesaurus:Interlobular_Duct 1 UBERON:0014716
ncithesaurus:Intercalated_Duct_of_the_Salivary_Gland_System 1 UBERON:0014727
ncithesaurus:Perivascular_Space 1 UBERON:0014930
ncithesaurus:Hilar_Portion_of_the_Hepatic_Duct 1 UBERON:0015423
ncithesaurus:External_Elastic_Membrane 1 UBERON:0015433
ncithesaurus:Tracheobronchial_Lymph_Node 1 UBERON:0015472
ncithesaurus:Body_of_the_Corpus_Callosum 1 UBERON:0015510
ncithesaurus:Hepatic_Lymph_Node 1 UBERON:0015859
ncithesaurus:Gastric_Lymph_Node 1 UBERON:0015863
ncithesaurus:Pelvic_Lymph_Node 1 UBERON:0015876
ncithesaurus:Neurovascular_Bundle 1 UBERON:0016630
ncithesaurus:Internal_Mammary_Vein 1 UBERON:0017646
ncithesaurus:Infraclavicular_Lymph_Node 1 UBERON:0035162
ncithesaurus:Posterior_Surface_of_the_Prostate 1 UBERON:0035165
ncithesaurus:Infraclavicular_Region 1 UBERON:0035168
ncithesaurus:Right_Ear 1 UBERON:0035174
ncithesaurus:Abdominal_Esophagus 1 UBERON:0035177
ncithesaurus:Calcarine_Artery 1 UBERON:0035183
ncithesaurus:Superficial_Lymphatic_Vessel 1 UBERON:0035198
ncithesaurus:Gastrocolic_Ligament 1 UBERON:0035201
ncithesaurus:Occipital_Lymph_Node 1 UBERON:0035204
ncithesaurus:Deep_Peroneal_Nerve 1 UBERON:0035207
ncithesaurus:Base_of_the_Heart 1 UBERON:0035213
ncithesaurus:Internal_Mammary_Lymph_Node 1 UBERON:0035219
ncithesaurus:Anterior_Temporal_Artery 1 UBERON:0035225
ncithesaurus:Superficial_Middle_Cerebral_Vein 1 UBERON:0035231
ncithesaurus:Medial_Femoral_Vein 1 UBERON:0035234
ncithesaurus:Anal_Sinus 1 UBERON:0035243
ncithesaurus:Posterior_External_Jugular_Vein 1 UBERON:0035249
ncithesaurus:Left_Subcostal_Vein 1 UBERON:0035252
ncithesaurus:Gallbladder_Neck 1 UBERON:0035267
ncithesaurus:Epigastric_Region 1 UBERON:0035276
ncithesaurus:Supraclavicular_Lymph_Node 1 UBERON:0035279
ncithesaurus:Left_Ear 1 UBERON:0035295
ncithesaurus:Inferolateral_Surface_of_the_Prostate 1 UBERON:0035310
ncithesaurus:Capsule_of_the_Prostate 1 UBERON:0035316
ncithesaurus:Anterior_Median_Fissure_of_Spinal_Cord 1 UBERON:0035319
ncithesaurus:Upper-outer_Quadrant_of_the_Breast 1 UBERON:0035328
ncithesaurus:Base_of_the_Prostate 1 UBERON:0035331
ncithesaurus:Posterior_Lobe_of_the_Prostate 1 UBERON:0035341
ncithesaurus:Lower-outer_Quadrant_of_the_Breast 1 UBERON:0035365
ncithesaurus:Anterior_Surface_of_the_Kidney 1 UBERON:0035368
ncithesaurus:Retroperitoneal_Lymph_Node 1 UBERON:0035371
ncithesaurus:Small_Cardiac_Vein 1 UBERON:0035374
ncithesaurus:Anterior_Cerebral_Artery_Branch 1 UBERON:0035380
ncithesaurus:Cystic_Vein 1 UBERON:0035392
ncithesaurus:Anterior_Longitudinal_Ligament 1 UBERON:0035419
ncithesaurus:Falx_Cerebelli 1 UBERON:0035425
ncithesaurus:Mediastinal_Pleura 1 UBERON:0035431
ncithesaurus:Right_Suprarenal_Vein 1 UBERON:0035435
ncithesaurus:Apex_of_the_Prostate 1 UBERON:0035441
ncithesaurus:Cervical_Esophagus 1 UBERON:0035450
ncithesaurus:Anterior_Parietal_Artery 1 UBERON:0035462
ncithesaurus:Endometrial_Cavity 1 UBERON:0035465
ncithesaurus:Costophrenic_Angle 1 UBERON:0035468
ncithesaurus:Right_Subcostal_Vein 1 UBERON:0035474
ncithesaurus:Lower-inner_Quadrant_of_the_Breast 1 UBERON:0035477
ncithesaurus:Surface_of_the_Prostate 1 UBERON:0035480
ncithesaurus:Left_Suprarenal_Vein 1 UBERON:0035483
ncithesaurus:Lymph_Node_Hilum 1 UBERON:0035495
ncithesaurus:Free_Nerve_Ending 1 UBERON:0035501
ncithesaurus:Anterior_Mediastinal_Lymph_Node 1 UBERON:0035520
ncithesaurus:Anterior_Surface_of_the_Prostate 1 UBERON:0035523
ncithesaurus:Superficial_Peroneal_Nerve 1 UBERON:0035526
ncithesaurus:Deep_Middle_Cerebral_Vein 1 UBERON:0035532
ncithesaurus:Gallbladder_Body 1 UBERON:0035536
ncithesaurus:Esophageal_Artery 1 UBERON:0035539
ncithesaurus:Upper-inner_Quadrant_of_the_Breast 1 UBERON:0035542
ncithesaurus:Deep_Lymphatic_Vessel 1 UBERON:0035545
ncithesaurus:Superficial_Vein 1 UBERON:0035550
ncithesaurus:Deep_Vein 1 UBERON:0035552
ncithesaurus:Anterior_Facial_Vein 1 UBERON:0035675
ncithesaurus:Subsegmental_Lymph_Node 1 UBERON:0035765
ncithesaurus:Middle_Lobe_of_the_Prostate 1 UBERON:0035766
ncithesaurus:Splenic_Pulp 1 UBERON:1000023
ncithesaurus:Muscularis_Propria 1 UBERON:0000381
ncithesaurus:Germinal_Layer 1 UBERON:0000923
ncithesaurus:Pons_Varolii 1 UBERON:0000988
ncithesaurus:Cortical_Column 1 UBERON:0001284
ncithesaurus:Epencephalon 1 UBERON:0001895
ncithesaurus:Internal_Geniculate_Body 1 UBERON:0001927
ncithesaurus:Primordium_of_the_Liver 1 UBERON:0003894
ncithesaurus:Pyramid_of_Malpighi 1 UBERON:0004200
ncithesaurus:Pancreatic_Endocrine_Secretion 1 UBERON:0004792
ncithesaurus:Pancreatic_Exocrine_Secretion 1 UBERON:0004793
ncithesaurus:Molecular_layer 1 UBERON:0005390
ncithesaurus:External_Pyramidal_Cell_Layer 1 UBERON:0005392
ncithesaurus:Superior_Constrictor_Muscle 1 UBERON:0006329
ncithesaurus:Lobe_of_the_Right_Lung 1 UBERON:0006518
ncithesaurus:Tunica_Albuginea 1 UBERON:0006643
ncithesaurus:Posterior 1 UBERON:0008788
ncithesaurus:Paraganglion 1 UBERON:0012279
ncithesaurus:Gland_of_Wolfring 1 UBERON:0013224
ncithesaurus:Collum_Dentis 1 UBERON:0015181
ncithesaurus:Ileocecocolic_Lymph_Node 1 UBERON:0016378
ncithesaurus:Adrenal_Gland_Tissue 1 UBERON:0018303
ncithesaurus:Life 1 UBERON:0000104
ncithesaurus:Developmental_Stage 1 UBERON:0000105
ncithesaurus:Pleural_Effusion 1 UBERON:0000175
ncithesaurus:Pus 1 UBERON:0000177
ncithesaurus:Atlanto-occipital_Joint-Atlanto 1 UBERON:0000220
ncithesaurus:Myelin 1 UBERON:0000345
ncithesaurus:Whole_Organism 1 UBERON:0000468
ncithesaurus:Digestive_System 1 UBERON:0001007
ncithesaurus:Pleural_Fluid 1 UBERON:0001087
ncithesaurus:Heart_Muscle 1 UBERON:0001133
ncithesaurus:Peritoneal_Fluid 1 UBERON:0001268
ncithesaurus:Phalanx_of_the_Foot 1 UBERON:0001449
ncithesaurus:Transverse_Sinus 1 UBERON:0001641
ncithesaurus:Upper_Jaw 1 UBERON:0001709
ncithesaurus:Lower_Jaw 1 UBERON:0001710
ncithesaurus:Insula 1 UBERON:0002022
ncithesaurus:Spiral_Organ_of_Corti 1 UBERON:0002227
ncithesaurus:Cerebral_Aqueduct 1 UBERON:0002289
ncithesaurus:Striatum 1 UBERON:0002435
ncithesaurus:Parieto-occipital_Sulcus 1 UBERON:0002695
ncithesaurus:Middle_Frontal_Gyrus 1 UBERON:0002702
ncithesaurus:Collateral_Sulcus 1 UBERON:0002716
ncithesaurus:Inferior_Temporal_Gyrus 1 UBERON:0002751
ncithesaurus:Superior_Temporal_Gyrus 1 UBERON:0002769
ncithesaurus:Middle_Temporal_Gyrus 1 UBERON:0002771
ncithesaurus:Nucleus_of_the_Hypoglossal_Nerve 1 UBERON:0002871
ncithesaurus:Inferior_Frontal_Gyrus 1 UBERON:0002998
ncithesaurus:Meckel_Diverticulum 1 UBERON:0003705
ncithesaurus:Dorsal_Thalamus 1 UBERON:0004703
ncithesaurus:Sigmoid_Sinus 1 UBERON:0005475
ncithesaurus:Straight_Sinus 1 UBERON:0005481
ncithesaurus:Adrenal_Artery 1 UBERON:0005624
ncithesaurus:Meconium 1 UBERON:0007109
ncithesaurus:Vesicular_Gland 1 UBERON:0007194
ncithesaurus:Egg_Yolk 1 UBERON:0007378
ncithesaurus:Transudate 1 UBERON:0007779
ncithesaurus:Exudate 1 UBERON:0007780
ncithesaurus:Egg_White 1 UBERON:0008944
ncithesaurus:Nucleus_of_the_Solitary_Tract 1 UBERON:0009050
ncithesaurus:Gravid_Uterus 1 UBERON:0009098

neuronames: NeuroNames

Overall, there were 3 invalid xrefs to external prefixed with neuronames (standardized to Bioregistry prefix neuronames) that did not match the standard pattern ^\d+$.

external_xref usages_count usages
neuronames:1192&questID=2709 1 UBERON:8440024
neuronames:3451&questID=1771 1 UBERON:8440026
neuronames:3452&questID=1771 1 UBERON:8440027

NIF_Subcellular: NIF Standard Ontology: Subcellular Entities

Overall, there were 12 invalid xrefs to external prefixed with NIF_Subcellular (standardized to Bioregistry prefix nlx.sub) that did not match the standard pattern ^\d+$.

external_xref usages_count usages
NIF_Subcellular:nlx_subcell_20090504 2 UBERON:0011917, UBERON:0011917
NIF_Subcellular:nlx_subcell_100205 1 UBERON:0000201
NIF_Subcellular:sao1397492660 1 UBERON:0000482
NIF_Subcellular:sao1145756102 1 UBERON:0001130
NIF_Subcellular:sao205380252 1 UBERON:0002606
NIF_Subcellular:FMA_83604 1 UBERON:0003719
NIF_Subcellular:nlx_subcell_20090503 1 UBERON:0005387
NIF_Subcellular:sao7547390221 1 UBERON:0011860
NIF_Subcellular:nlx_subcell_20090502 1 UBERON:0011915
NIF_Subcellular:FMA_83606 1 UBERON:0012456
NIF_Subcellular:nlx_subcell_100209 1 UBERON:0018687

NIFSTD: NIF Standard Ontology

Overall, there were 337 invalid xrefs to external prefixed with NIFSTD (standardized to Bioregistry prefix nif.std) that did not match the standard pattern ^BAMSC\d+$.

external_xref usages_count usages
NIFSTD:NeuroNames_abbrevSource 265 UBERON:0000007, UBERON:0000435, UBERON:0000941, UBERON:0001579, UBERON:0001643, …
NIFSTD:SumsDB_abbrevSource 52 UBERON:0004717, UBERON:0004718, UBERON:0006095, UBERON:0006096, UBERON:0006099, …
NIFSTD:Swanson-rat-1998_abbrevSource 13 UBERON:0014589, UBERON:0014590, UBERON:0014591, UBERON:0014592, UBERON:0014593, …
NIFSTD:Swanson-rat-1992_abbrevSource 3 UBERON:0014602, UBERON:0014603, UBERON:0014604
NIFSTD:oen_0001107 2 UBERON:0035015, UBERON:0035015
NIFSTD:FMAID_7191 1 UBERON:0002104
NIFSTD:Paxinos-Franklin-mouse-2001_abbrevSource 1 UBERON:0002701

NLM: National Library of Medicine Catalog

Overall, there were 4 invalid xrefs to external prefixed with NLM (standardized to Bioregistry prefix nlm) that did not match the standard pattern ^\d+$.

external_xref usages_count usages
NLM:endocrine+system 1 UBERON:0000949
NLM:alimentary+system 1 UBERON:0001007
NLM:nervous+system 1 UBERON:0001016
NLM:thymus 1 UBERON:0002370

OBI: Ontology for Biomedical Investigations

Overall, there were 1 invalid xrefs to external prefixed with OBI (standardized to Bioregistry prefix obi) that did not match the standard pattern ^\d{7}$.

external_xref usages_count usages
OBI:MC 1 UBERON:0012125

PBA: Primate Brain Atlas

Overall, there were 1 invalid xrefs to external prefixed with PBA (standardized to Bioregistry prefix pba) that did not match the standard pattern ^\d+$.

external_xref usages_count usages
PBA:BN 1 UBERON:0010011

TAO: Teleost Anatomy Ontology

Overall, there were 603 invalid xrefs to external prefixed with TAO (standardized to Bioregistry prefix tao) that did not match the standard pattern ^\d{7}$.

external_xref usages_count usages
TAO:wd 481 UBERON:0002534, UBERON:0002543, UBERON:0004740, UBERON:0006606, UBERON:0008917, …
TAO:GA_TG 66 UBERON:0004865, UBERON:2000104, UBERON:2000127, UBERON:2000250, UBERON:2000364, …
TAO:curator 27 UBERON:0000151, UBERON:0000152, UBERON:0003097, UBERON:0005744, UBERON:0007380, …
TAO:pem 7 UBERON:2001675, UBERON:2001676, UBERON:2001677, UBERON:2001678, UBERON:2001680, …
TAO:Arratia_2008 4 UBERON:2001584, UBERON:2001829, UBERON:2001830, UBERON:2002165
TAO:ga_tg 3 UBERON:2000103, UBERON:2002020, UBERON:2002089
TAO:doi:10.1046/j.1096-3642.2002.00014.x 2 UBERON:2001191, UBERON:2001192
TAO:MAH 1 UBERON:0001703
TAO:Arratia_Schultze_1992 1 UBERON:2000602
TAO:Patterson_1968 1 UBERON:2000602
TAO:je 1 UBERON:2001275
TAO:w 1 UBERON:2001957
TAO:Bridge_1877 1 UBERON:2000127
TAO:Goodrich_1930 1 UBERON:2000127
TAO:Jollie_1984 1 UBERON:2000127
TAO:Regan_1923 1 UBERON:2000127
TAO:Arratia_Schultze_1990 1 UBERON:2000452
TAO:Harrington_1955 1 UBERON:2000663
TAO:Weitzman_1962 1 UBERON:2000663
TAO:Bird_2003 1 UBERON:2001553

UBERON: Uber Anatomy Ontology

Overall, there were 214 invalid xrefs to external prefixed with UBERON (standardized to Bioregistry prefix uberon) that did not match the standard pattern ^\d+$.

external_xref usages_count usages
UBERON:cjm 173 UBERON:0000004, UBERON:0000004, UBERON:0000012, UBERON:0000172, UBERON:0000977, …
UBERON:EJS 19 UBERON:1000000, UBERON:1000001, UBERON:1000002, UBERON:1000004, UBERON:1000005, …
UBERON:mah 4 UBERON:0001427, UBERON:0001428, UBERON:0015001, UBERON:0015003
UBERON:skansa 4 UBERON:0012288, UBERON:0012289, UBERON:0012290, UBERON:0013649
UBERON:xp 3 UBERON:0003133, UBERON:0003134, UBERON:0003135
UBERON:automatic 2 UBERON:0004766, UBERON:0004766
UBERON:gg 2 UBERON:0005982, UBERON:0006060
UBERON:md 2 UBERON:0013739, UBERON:0013740
UBERON:gvg 1 UBERON:0005273
UBERON:CL_meeting_20110725 1 UBERON:0008921
UBERON:nv 1 UBERON:0016928
UBERON:drseb 1 UBERON:0019207
UBERON:rc 1 UBERON:0036015

VHOG: Vertebrate Homologous Organ Group Ontology

Overall, there were 5 invalid xrefs to external prefixed with VHOG (standardized to Bioregistry prefix vhog) that did not match the standard pattern ^\d{7}$.

external_xref usages_count usages
VHOG:OG 4 UBERON:0005872, UBERON:0005873, UBERON:0005874, UBERON:0005875
VHOG:FB 1 UBERON:0000112

WB: Wormbase Gene

Overall, there were 3 invalid xrefs to external prefixed with WB (standardized to Bioregistry prefix wormbase) that did not match the standard pattern ^WB[A-Z][a-z]+\d+$.

external_xref usages_count usages
WB:Paper00000938 1 UBERON:0000934
WB:Paper00000653 1 UBERON:0000954
WB:rynl 1 UBERON:0001016

XAO: Xenopus Anatomy Ontology

Overall, there were 7 invalid xrefs to external prefixed with XAO (standardized to Bioregistry prefix xao) that did not match the standard pattern ^\d{7}$.

external_xref usages_count usages
XAO:EJS 4 UBERON:0015179, UBERON:3010297, UBERON:3010299, UBERON:4000013
XAO:curator 2 UBERON:3010326, UBERON:3010404
XAO:curators 1 UBERON:0009500

ZFA: Zebrafish anatomy and development ontology

Overall, there were 14 invalid xrefs to external prefixed with ZFA (standardized to Bioregistry prefix zfa) that did not match the standard pattern ^\d{7}$.

external_xref usages_count usages
ZFA:curator 9 UBERON:0008229, UBERON:0014371, UBERON:0014903, UBERON:0018549, UBERON:2000120, …
ZFA:CVS 2 UBERON:0016499, UBERON:0018674
ZFA:yb 1 UBERON:0002539
ZFA:YMB 1 UBERON:0016499
ZFA:ZDB-PUB-060323-12 1 UBERON:2005245

ZFIN: Zebrafish Information Network Gene

Overall, there were 521 invalid xrefs to external prefixed with ZFIN (standardized to Bioregistry prefix zfin) that did not match the standard pattern ^ZDB\-\w+\-\d+\-\d+$.

external_xref usages_count usages
ZFIN:curator 515 UBERON:0000007, UBERON:0000966, UBERON:0000991, UBERON:0001016, UBERON:0001081, …
ZFIN:Curator 2 UBERON:0005817, UBERON:2005210
ZFIN:cvs 1 UBERON:0000089
ZFIN:yb 1 UBERON:0003066
ZFIN:090511-18 1 UBERON:2002145
ZFIN:CVS 1 UBERON:2005265

zfin: Zebrafish Information Network Gene

Overall, there were 1 invalid xrefs to external prefixed with zfin (standardized to Bioregistry prefix zfin) that did not match the standard pattern ^ZDB\-\w+\-\d+\-\d+$.

external_xref usages_count usages
zfin:curator 1 UBERON:0008911
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