This document details the invalid local unique identifiers used in CURIEs
for node, synonym, and definition cross-references in tao.
CL: Cell OntologyOverall, there were 154 invalid
xrefs to external prefixed with CL (standardized to Bioregistry
prefix cl) that
did not match the standard pattern ^\d{7}$.
| external_xref | usages_count | usages |
|---|---|---|
CL:curator |
153 | TAO:0002148, TAO:0002182, TAO:0002211, TAO:0005243, TAO:0005322, … |
CL:Curator |
1 | TAO:0005242 |
TAO: Teleost Anatomy OntologyOverall, there were 670 invalid
xrefs to external prefixed with TAO (standardized to Bioregistry
prefix tao) that
did not match the standard pattern ^\d{7}$.
| external_xref | usages_count | usages |
|---|---|---|
TAO:wd |
546 | TAO:0000027, TAO:0000037, TAO:0000052, TAO:0000078, TAO:0000107, … |
TAO:GA_TG |
80 | TAO:0000015, TAO:0000104, TAO:0000127, TAO:0000191, TAO:0000250, … |
TAO:pem |
8 | TAO:0000367, TAO:0001675, TAO:0001676, TAO:0001677, TAO:0001678, … |
TAO:MAH |
6 | TAO:0000189, TAO:0000290, TAO:0000351, TAO:0001410, TAO:0001414, … |
TAO:ga_tg |
4 | TAO:0000103, TAO:0000656, TAO:0002020, TAO:0002089 |
TAO:curator |
4 | TAO:0000258, TAO:0002149, TAO:0002150, TAO:0005225 |
TAO:Arratia_2008 |
4 | TAO:0001584, TAO:0001829, TAO:0001830, TAO:0002165 |
TAO:doi:10.1046/j.1096-3642.2002.00014.x |
2 | TAO:0001191, TAO:0001192 |
TAO:Arratia_Schultze_1992 |
1 | TAO:0000602 |
TAO:Patterson_1968 |
1 | TAO:0000602 |
TAO:Arratia and Schultze_1992 |
1 | TAO:0000660 |
TAO:je |
1 | TAO:0001275 |
TAO:VSAO_workshop |
1 | TAO:0001890 |
TAO:w |
1 | TAO:0001957 |
TAO:Bridge_1877 |
1 | TAO:0000127 |
TAO:Goodrich_1930 |
1 | TAO:0000127 |
TAO:Jollie_1984 |
1 | TAO:0000127 |
TAO:Regan_1923 |
1 | TAO:0000127 |
TAO:Arratia_Schultze_1990 |
1 | TAO:0000452 |
TAO:Harrington_1955 |
1 | TAO:0000663 |
TAO:Weitzman_1962 |
1 | TAO:0000663 |
TAO:Bird 2003 |
1 | TAO:0001553 |
TAO:Bird and Mabee 2003 |
1 | TAO:0001553 |
TAO:Fink and Fink 1981 |
1 | TAO:0001553 |
ZFA: Zebrafish anatomy and development ontologyOverall, there were 4 invalid
xrefs to external prefixed with ZFA (standardized to Bioregistry
prefix zfa) that
did not match the standard pattern ^\d{7}$.
| external_xref | usages_count | usages |
|---|---|---|
ZFA:curator |
3 | TAO:0002135, TAO:0002136, TAO:0002141 |
ZFA:ZDB-PUB-060323-12 |
1 | TAO:0005245 |
ZFIN: Zebrafish Information Network GeneOverall, there were 811 invalid
xrefs to external prefixed with ZFIN (standardized to Bioregistry
prefix zfin) that
did not match the standard pattern ^ZDB\-\w+\-\d+\-\d+$.
| external_xref | usages_count | usages |
|---|---|---|
ZFIN:curator |
805 | TAO:0000000, TAO:0000001, TAO:0000006, TAO:0000007, TAO:0000008, … |
ZFIN:Curator |
4 | TAO:0005153, TAO:0005165, TAO:0005166, TAO:0005210 |
ZFIN:090511-18 |
1 | TAO:0002145 |
ZFIN:CVS |
1 | TAO:0005265 |