oquat

cmo

This document details the invalid local unique identifiers used in CURIEs for node, synonym, and definition cross-references in cmo. See the GitHub repository.

BRENDA: BRENDA Enzyme

Overall, there were 1 invalid xrefs to external prefixed with BRENDA (standardized to Bioregistry prefix brenda) that did not match the standard pattern ^((\d+\.-\.-\.-)|(\d+\.\d+\.-\.-)|(\d+\.\d+\.\d+\.-)|(\d+\.\d+\.\d+\.\d+))$.

external_xref	usages_count	usages
BRENDA:EC2.3.2.2	1	CMO:0001921

ECGOntology: Electrocardiogram Ontology

Overall, there were 4 invalid xrefs to external prefixed with ECGOntology (standardized to Bioregistry prefix ecg) that did not match the standard pattern ^\d+$.

external_xref	usages_count	usages
ECGOntology:ECG_000000042	1	CMO:0000232
ECGOntology:ECG_000000824	1	CMO:0000234
ECGOntology:ECG_000000682	1	CMO:0000235
ECGOntology:ECG_000000011	1	CMO:0000278

PMID: PubMed

Overall, there were 1 invalid xrefs to external prefixed with PMID (standardized to Bioregistry prefix pubmed) that did not match the standard pattern ^\d+$.

external_xref	usages_count	usages
PMID:_25742564	1	CMO:0004066

QTLdb: Animal Genome QTL

Overall, there were 38 invalid xrefs to external prefixed with QTLdb (standardized to Bioregistry prefix qtldb) that did not match the standard pattern ^\d+$.

external_xref	usages_count	usages
QTLdb:animal_QTL_data	19	CMO:0000396, CMO:0000399, CMO:0000403, CMO:0000408, CMO:0000415, …
QTLdb:CAP	19	CMO:0000402, CMO:0000453, CMO:0001306, CMO:0001307, CMO:0001308, …

RGD: Rat Genome Database

Overall, there were 190 invalid xrefs to external prefixed with RGD (standardized to Bioregistry prefix rgd) that did not match the standard pattern ^\d{4,}$.

external_xref	usages_count	usages
RGD:JRS	113	CMO:0000068, CMO:0000069, CMO:0000070, CMO:0000075, CMO:0000179, …
RGD:MS	74	CMO:0000011, CMO:0000019, CMO:0000035, CMO:0000039, CMO:0000040, …
RGD:SL	3	CMO:0001037, CMO:0001210, CMO:0001492

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