This document details the invalid local unique identifiers used in CURIEs
for node, synonym, and definition cross-references in bto. See the GitHub repository.
ECACC: European Collection of Authenticated Cell CultureOverall, there were 1 invalid
xrefs to external prefixed with ECACC (standardized to Bioregistry
prefix ecacc) that
did not match the standard pattern ^\d+$.
| external_xref | usages_count | usages |
|---|---|---|
ECACC:European_Collection_of_Cell_Cultures |
1 | BTO:0006406 |
Fishbase: FishBaseOverall, there were 1 invalid
xrefs to external prefixed with Fishbase (standardized to Bioregistry
prefix fishbase.species) that
did not match the standard pattern ^\d+$.
| external_xref | usages_count | usages |
|---|---|---|
Fishbase:http://www.fishbase.org/Glossary/Glossary.cfm?TermEnglish=venom+apparatus |
1 | BTO:0002065 |
Flybase: FlyBase GeneOverall, there were 1 invalid
xrefs to external prefixed with Flybase (standardized to Bioregistry
prefix flybase) that
did not match the standard pattern ^FB\w{2}\d{7}$.
| external_xref | usages_count | usages |
|---|---|---|
Flybase:http://flybase.bio.indiana.edu/allied-data/lk/interactive-fly/lewheld/preface.htm |
1 | BTO:0001464 |
HyperCLDB: Cell Line DatabaseOverall, there were 93 invalid
xrefs to external prefixed with HyperCLDB (standardized to Bioregistry
prefix cldb) that
did not match the standard pattern ^(cl|tum)\d+$.
| external_xref | usages_count | usages |
|---|---|---|
HyperCLDB:http://www.biotech.ist.unige.it/ |
91 | BTO:0000046, BTO:0000111, BTO:0000179, BTO:0000295, BTO:0000304, … |
HyperCLDB:http://bioinformatics.istge.it/ |
2 | BTO:0005030, BTO:0005492 |
ISSN: International Standard Serial NumberOverall, there were 1 invalid
xrefs to external prefixed with ISSN (standardized to Bioregistry
prefix issn) that
did not match the standard pattern ^\d{4}-\d{3}[\dX]$.
| external_xref | usages_count | usages |
|---|---|---|
ISSN:0302-766X_(printed_version)_ISSN_1432-0878_(electronic_version) |
1 | BTO:0001198 |
Lonza: LonzaOverall, there were 1 invalid
xrefs to external prefixed with Lonza (standardized to Bioregistry
prefix lonza) that
did not match the standard pattern ^\d+$.
| external_xref | usages_count | usages |
|---|---|---|
Lonza:www.lonza.com/ |
1 | BTO:0006077 |
MedlinePlus: MedlinePlus Health TopicsOverall, there were 1 invalid
xrefs to external prefixed with MedlinePlus (standardized to Bioregistry
prefix medlineplus) that
did not match the standard pattern ^\d+$.
| external_xref | usages_count | usages |
|---|---|---|
MedlinePlus:A_service_of_the_U.S._National_Library_of_Medicine_From_the_National_Institutes_of_Health |
1 | BTO:0005035 |
MGI: Mouse Genome InformaticsOverall, there were 1 invalid
xrefs to external prefixed with MGI (standardized to Bioregistry
prefix mgi) that
did not match the standard pattern ^\d+$.
| external_xref | usages_count | usages |
|---|---|---|
MGI:http://www.mousedb.net/searches/GO.cgi?id=GO:0060935 |
1 | BTO:0003093 |
NASC: NASC codeOverall, there were 1 invalid
xrefs to external prefixed with NASC (standardized to Bioregistry
prefix nasc) that
did not match the standard pattern ^(\w+)?\d+$.
| external_xref | usages_count | usages |
|---|---|---|
NASC:The_European_Arabidopsis_Stock_Centre |
1 | BTO:0003086 |
Patent: Google PatentsOverall, there were 2 invalid
xrefs to external prefixed with Patent (standardized to Bioregistry
prefix google.patent) that
did not match the standard pattern ^[A-Z]{2,4}\d+([A-Z])?([0-9])?$.
| external_xref | usages_count | usages |
|---|---|---|
Patent:CA_Patent_2469027 |
2 | BTO:0004841, BTO:0004952 |
PMID: PubMedOverall, there were 7 invalid
xrefs to external prefixed with PMID (standardized to Bioregistry
prefix pubmed) that
did not match the standard pattern ^\d+$.
| external_xref | usages_count | usages |
|---|---|---|
PMID:_17179233 |
1 | BTO:0004783 |
PMID:_8635507 |
1 | BTO:0005332 |
PMID:_21552385 |
1 | BTO:0005353 |
PMID:_6178358 |
1 | BTO:0005386 |
PMID::8305734 |
1 | BTO:0005634 |
PMID: 29991048 |
1 | BTO:0006394 |
PMID: 9522462 |
1 | BTO:0006473 |
WormBase: Wormbase GeneOverall, there were 1 invalid
xrefs to external prefixed with WormBase (standardized to Bioregistry
prefix wormbase) that
did not match the standard pattern ^WB[A-Z][a-z]+\d+$.
| external_xref | usages_count | usages |
|---|---|---|
WormBase:http://www.wormbase.org/ |
1 | BTO:0003039 |
Wormbase: Wormbase GeneOverall, there were 1 invalid
xrefs to external prefixed with Wormbase (standardized to Bioregistry
prefix wormbase) that
did not match the standard pattern ^WB[A-Z][a-z]+\d+$.
| external_xref | usages_count | usages |
|---|---|---|
Wormbase:https://wormbase.org//species/all/anatomy_term/ |
1 | BTO:0006342 |