oquat

pubmed: PubMed

This page summarize the different resources that reference pubmed but use local unique identifiers that do not match the standard pattern of ^\d+$. Of the 18 resources, 3 variants on the standard prefix were found: [‘Medline’, ‘PMID’, ‘PubMed’].

bto: BRENDA Tissue Ontology

Identifiers for this prefix are given incorrectly in bto. See the GitHub repository.

external_xref usages_count usages
PMID:_17179233 1 BTO:0004783
PMID:_8635507 1 BTO:0005332
PMID:_21552385 1 BTO:0005353
PMID:_6178358 1 BTO:0005386
PMID::8305734 1 BTO:0005634
PMID: 29991048 1 BTO:0006394
PMID: 9522462 1 BTO:0006473

cco: Cell Cycle Ontology

Identifiers for this prefix are given incorrectly in cco.

external_xref usages_count usages
PubMed:unassigned4 393 IntAct:EBI-871058, IntAct:EBI-871062, IntAct:EBI-871070, IntAct:EBI-871082, IntAct:EBI-871090, …
PubMed:unassigned701 243 IntAct:EBI-6455567, IntAct:EBI-6455593, IntAct:EBI-6455606, IntAct:EBI-6455619, IntAct:EBI-6455710, …
PubMed:unassigned5 24 IntAct:EBI-308785, IntAct:EBI-308814, IntAct:EBI-308822, IntAct:EBI-308858, IntAct:EBI-308862, …
PubMed:unassigned85 9 IntAct:EBI-1750957, IntAct:EBI-1769410, IntAct:EBI-1769436, IntAct:EBI-1769463, IntAct:EBI-1769475, …
PubMed:unassigned947 4 IntAct:EBI-8789280, IntAct:EBI-8789291, IntAct:EBI-8789308, IntAct:EBI-8789327
PubMed:unassigned1245 3 IntAct:EBI-9979453, IntAct:EBI-9979697, IntAct:EBI-9985143
PMID:pm 1 GO:1990459
PMID: 1 MI:1127

efo: Experimental Factor Ontology

Identifiers for this prefix are given incorrectly in efo. See the GitHub repository.

external_xref usages_count usages
PMID: 11246871 1 EFO:0002540
PMID:PMC1531688 1 EFO:0005725
PMID: 3897439 1 EFO:0005910
PMID: 8788275 1 EFO:0005913
PMID:27149984 1 EFO:0007836
PMID: 31636452 1 EFO:0010605
PMID:25167691 1 EFO:0010695
PMID: 32355309 1 EFO:0010749
PMID: 19881539 1 EFO:0022445

enm: eNanoMapper ontology

Identifiers for this prefix are given incorrectly in enm.

external_xref usages_count usages
PMID:PMC1531688 1 EFO:0005725
PMID: 3897439 1 EFO:0005910
PMID: 8788275 1 EFO:0005913
PMID:27149984 1 EFO:0007836
PMID: 31636452 1 EFO:0010605
PMID: 32355309 1 EFO:0010749

fypo: Fission Yeast Phenotype Ontology

Identifiers for this prefix are given incorrectly in fypo. See the GitHub repository.

external_xref usages_count usages
`PMID:34805795    
PomBase:val` 1 FYPO:0007907
PMID::8247131 1 FYPO:0001686

hp: Human Phenotype Ontology

Identifiers for this prefix are given incorrectly in hp. See the GitHub repository.

external_xref usages_count usages
PMID:probinson 2 HP:0009659, HP:0030789
PMID:31910377|PMID:32179430 1 HP:0002494
PMID:36115370|PMID:30725708|PMID:36872502 1 HP:0006979
PMID:34557672|PMID:32374025 1 HP:0007159
PMID:35551411|PMID:36031317 1 HP:0010536
PMID:35808955|PMID:28613628|PMID:34732752 1 HP:0012452
PMID:32644427|PMID:30458142 1 HP:0025236
PMID:30228690|PMID:35624073 1 HP:0030050
PMID:30085516rdfs:comment 1 HP:0033585
PMID:27862615|PMID:18622776 1 HP:5200212
PMID:20636189|PMID:34541953 1 HP:5200220
PMID:30416391;PMID:31582814 1 HP:5200235
PMID:29779616|PMID:34191224 1 HP:5200283
PMID:33205754|PMID:31553690 1 HP:5200289
PMID:23997705|PMID:22560828 1 HP:5200292
PMID:35388549|PMID:36866491 1 HP:5200294
PMID:32809562|PMID:36507891 1 HP:5200295
PMID:31997686;PMID:17391357 1 HP:5200310
PMID:24001164|PMID:26851616 1 HP:5200321

mi: Molecular Interactions Controlled Vocabulary

Identifiers for this prefix are given incorrectly in mi. See the GitHub repository.

external_xref usages_count usages
PMID::17072308 1 MI:0813
PMID:ID:11604014 1 MI:1075
PMID:13846364. 1 MI:1197

mod: Protein modification

Identifiers for this prefix are given incorrectly in mod. See the GitHub repository.

external_xref usages_count usages
PubMed: 1 MOD:01182

mondo: Mondo Disease Ontology

Identifiers for this prefix are given incorrectly in mondo. See the GitHub repository.

external_xref usages_count usages
PMID:PMID%3A+19243607 1 MONDO:0008644

mpath: Mouse pathology ontology

Identifiers for this prefix are given incorrectly in mpath. See the GitHub repository.

external_xref usages_count usages
PMID: 11794381 1 MPATH:40
PMID: 21191096 1 MPATH:815

pato: Phenotype And Trait Ontology

Identifiers for this prefix are given incorrectly in pato. See the GitHub repository.

external_xref usages_count usages
Medline:http://www.nlm.nih.gov/medlineplus 1 PATO:0002048

plana: Planarian Anatomy and Schmidtea mediterranean Developmental Stage Ontology

Identifiers for this prefix are given incorrectly in plana. See the GitHub repository.

external_xref usages_count usages
PMID: 20967238 2 PLANA:0003800, PLANA:0003801
PMID: 23652002 1 PLANA:0003504
PMID: 29674431 1 PLANA:0003802
PMID: 29674432 1 PLANA:0003803
PMID: 29674433 1 PLANA:0003804
PMID: 22074376 1 PLANA:0002042

pw: Pathway ontology

Identifiers for this prefix are given incorrectly in pw. See the GitHub repository.

external_xref usages_count usages
PubMed:2003,_v._285,_f1-f8. 2 PW:0000182, PW:0000183
PubMed:2001,_v.27,_171-179. 1 PW:0000144
PubMed:Neuron,_2004,_v42,_p897-912;_Cellular_Signaling,_2004,_v16,_p127-36. 1 PW:0000169
PubMed:2004,_v._17,_38047 1 PW:0000174
PubMed:2004,_v.17,_38-47. 1 PW:0000175
PubMed:2004,_v.29(1),_32-38. 1 PW:0000179
PubMed:TIBS,_2004,_v._29(1),_32-38. 1 PW:0000180
PubMed:Several_articles_in_PubMed 1 PW:0000204
PubMed:TIBS,_2004,_v29_(5),_p265-273 1 PW:0000206
PubMed:Science,_2002,_v296,_p1564-7 1 PW:0000210
PubMed:Nature_Reviews,_Mol._Cell_Biology,_2001,_v2,_p369-77. 1 PW:0000231
PubMed:Annu._Rev._Neursci._2003,_v26,_701-28. 1 PW:0000274
PMID:9212076; 1 PW:0000414
PubMed:Several_articles 1 PW:0000668

so: Sequence types and features ontology

Identifiers for this prefix are given incorrectly in so. See the GitHub repository.

external_xref usages_count usages
PMID: 24572720 5 SO:0002344, SO:0002345, SO:0002346, SO:0002347, SO:0002348
PMID:12537576:16827941 4 SO:0001158, SO:0001159, SO:0001160, SO:0001161
PMID: 118436 2 SO:0002336, SO:0002337
PMID: 29474379 2 SO:0002336, SO:0002337
PMID: 3136294 2 SO:0002336, SO:0002337
PMID:16827941:12537576 1 SO:0001157
PMID:12537576:15231738 1 SO:0001162
PMID:15388847,PMID:16524884 1 SO:0002235
PMID: 19407924 1 SO:0002293
PMID: 16236432 1 SO:0002350
PMID: 17608616 1 SO:0002350

tgma: Mosquito gross anatomy ontology

Identifiers for this prefix are given incorrectly in tgma. See the GitHub repository.

external_xref usages_count usages
PubMed:PMID:15857775 9 TGMA:0000001, TGMA:0000710, TGMA:0000910, TGMA:0001818, TGMA:0001849, …

unimod: Unimod protein modification database for mass spectrometry

Identifiers for this prefix are given incorrectly in unimod.

external_xref usages_count usages
PMID:http://www.ncbi.nlm.nih.gov/pubmed/11869872 4 UNIMOD:1281, UNIMOD:1310, UNIMOD:1315, UNIMOD:1317
PMID:http://www.ncbi.nlm.nih.gov/pubmed/21432907 1 UNIMOD:1036
PMID:http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5369209 1 UNIMOD:1253
PMID:http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=637568&loc=ec_rcs 1 UNIMOD:1262
PMID:http://www.ncbi.nlm.nih.gov/pubmed/21740851 1 UNIMOD:1327
PMID:http://www.ncbi.nlm.nih.gov/pubmed/?term=2475130 1 UNIMOD:1380
PMID:http://www.ncbi.nlm.nih.gov/pubmed/1242713 1 UNIMOD:1381
PMID:http://www.ncbi.nlm.nih.gov/pubmed/2475130 1 UNIMOD:1381
PMID:http://www.ncbi.nlm.nih.gov/pubmed/18528979 1 UNIMOD:1382
PMID:http://www.ncbi.nlm.nih.gov/pubmed/?term=23908237 1 UNIMOD:1387
PMID:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3523197/ 1 UNIMOD:1839
PMID:http://www.ncbi.nlm.nih.gov/pubmed/23924801 1 UNIMOD:1840
PMID:https://www.ncbi.nlm.nih.gov/pubmed/14638685 1 UNIMOD:1875
PMID:https://www.ncbi.nlm.nih.gov/pubmed/16704222 1 UNIMOD:1875
PMID:https://books.google.co.in/books?id=IOuPDwAAQBAJ&pg=PA333&lpg=PA333&dq=kdo+220+mass&source=bl&ots=t--BcUkzNH&sig=ACfU3U2lNj05UnTthH1BD6fS0jC6rxYpFw&hl=en&sa=X&ved=2ahUKEwjLmPfoic7nAhWA7XMBHRsiAk4Q6AEwCnoECAoQAQ#v=onepage&q=kdo%20220%20mass&f=false 1 UNIMOD:2022
PMID:https://pubmed.ncbi.nlm.nih.gov/8829804/ 1 UNIMOD:2040
PMID:http://www.ncbi.nlm.nih.gov/pubmed/14670044?dopt=AbstractPlus 1 UNIMOD:986

vt: Vertebrate trait ontology

Identifiers for this prefix are given incorrectly in vt. See the GitHub repository.

external_xref usages_count usages
PMID:0-87893-258-5 1 VT:0003359

xco: Experimental condition ontology

Identifiers for this prefix are given incorrectly in xco. See the GitHub repository.

external_xref usages_count usages
PMID:_35999905 1 XCO:0001116