oquat

Invalid Identifier Analysis

This analysis has been conducted across all ontologies listed in the Bioregistry by loading them from source with ROBOT, converting to OBO Graph JSON, then looking through all nodes’ xrefs, nodes’ synonyms’ xrefs, and nodes’ definitions’ xrefs to see which ones make references using identifiers that don’t validate against patterns in the Bioregistry.

xref_prefix sources count example_xref example_node
clo cellosaurus 34124 CLO:CLO_0022818 Cellosaurus#CVCL:5E83
reactome go, fbcv, cco, pw, orphanet, efo, cmpo 24551 Reactome:Q9NQ40 http://www.orpha.net/ORDO/Orphanet_227053
hgnc cco, so 13618 HGNC:HGNC:15886 NCBIGene:25980
mgi uberon, lpt, ccf, vt, go, cco, enm, mp, bto, so 13467 MGI:csmith GO:1903702
mmrrc cellosaurus 10729 MMRRC:MMRRC:012172-UCD Cellosaurus#CVCL:LS18
vfb fbbt 9841 VFB:FBbt_00100041 FBbt:00100041
funderregistry ror 9025 funderregistry:501100003075 https://ror.org/05ct91r78
umls covoc, hp, efo, epso, mondo 2799 UMLS:CN236658 MONDO:0002050
rcb cellosaurus 2702 RCB:HPS1406 Cellosaurus#CVCL:A3UP
bto cellosaurus, ccf, cl, efo 2422 BTO:BTO:0003314 Cellosaurus#CVCL:0354
icd11 doid, covoc, orphanet, efo, mondo 2205 ICD11:RA01.0 MONDO:0100096
jcrb cellosaurus 1414 JCRB:IFO50283 Cellosaurus#CVCL:0346
orphanet.ordo cellosaurus, efo 1362 ORDO:Orphanet_36236 EFO:1001849
efo cellosaurus, mmo 1312 EFO:EFO_0006746 Cellosaurus#CVCL:1662
agricola chebi, enm 1191 AGR:IND43666813 CHEBI:39393
ebisc cellosaurus 1132 EBiSC:DRICUi037-A Cellosaurus#CVCL:D0EF
omim rdo, bao, doid, pw, hp, efo, epso, mondo 958 OMIM:genemap2 MONDO:0008501
mesh bao, uberon, xco, ccf, icdo, vt, hom, pw, covoc, ro, zfa, enm, dto, efo, mp, epso, mondo 695 MESH:A03.492.411 UBERON:0000160
tkg cellosaurus 642 TKG:TKG 0346 Cellosaurus#CVCL:H720
nlx.sub bao, uberon, ccf, go, plana, cco, covoc, cmpo 606 NIF_Subcellular:sao451912436 GO:0005794
pride cellosaurus, pride 603 PRIDE:PRIDE PRIDE:0000415
eccode go, cco, to, cmpo 461 EC:3.1.-.- GO:0004518
unimod mod 432 Unimod:449#T MOD:00392
ncit bao, uberon, xao, ccf, icdo, idomal, cl, plana, pw, covoc, hp, dto, efo, mp, epso, mondo 396 NCIT:C92189-variant EFO:1001417
geonames enm, envo, bcio, aeon 359 Geonames:T.BCH ENVO:00000091
fbtc cellosaurus, enm, efo 333 FBtc:FBtc0000191 EFO:0005745
coriell cellosaurus 235 Coriell:S005032 Cellosaurus#CVCL:V875
bcrc cellosaurus 203 BCRC:SC81054 Cellosaurus#CVCL:QY30
estdab cellosaurus 197 ESTDAB:ESTDAB-138 Cellosaurus#CVCL:A151
gmelin chebi, msio, covoc, enm 177 Gmelin:485 CHEBI:15379
hmdb chebi, enm, efo 177 HMDB:0038585 EFO:0803455
kegg bao, chebi, doid, cco, pw, covoc, efo, epso 166 KEGG:05340 DOID:612
smid chebi 150 SMID:ascr%235%0D CHEBI:78829
nif.std bao, uberon, ccf, cl, covoc, enm, efo, mp, epso, mondo 141 NIFSTD:NeuroNames_abbrevSource UBERON:0002696
mondo rdo, covoc, efo, mondo 118 MONDO:patterns/location_top EFO:0000684
pubmed unimod, fypo, xco, mod, tgma, vt, pato, plana, cco, pw, hp, enm, efo, mi, bto, mondo, mpath, so 110 PubMed:PMID:15857775 TGMA:0000710
icd10 orphanet, hp, efo, epso 107 ICD10:Q00.Q99 MONDO:0000839
atcc cellosaurus 105 ATCC:CRM-HTB-174 Cellosaurus#CVCL:1561
ihw cellosaurus 93 IHW:11w 8041 Cellosaurus#CVCL:V081
cas miro, chebi, vsmo, enm, efo, xlmod, peco 82 CAS:1583915 EFO:0022198
icd9 covoc, enm, efo, epso, mondo 82 ICD9:390-459.99 EFO:0000319
resid mod 81 RESID:AA0492#CYS MOD:01444
tcdb go, cco 78 TC:2.A.2.-.- GO:0015486
icdo rdo, bao, doid, hp, efo, epso, mondo, mpath 76 ICDO:M8970/3 DOID:687
door fbbt 68 DoOR:Or43b FBbt:00067050
smpdb pw 66 SMP:00333 PW:0001071
wormbase uberon, wbbt, go, fbcv, wbls, wbphenotype, bto, so 65 WB:cgc3760 WBbt:0005832
drugbank chebi 57 DrugBank:DBSALT000347 CHEBI:58987
tao uberon, tao, ccf, vsao, hom, ro, zfa, tto, vto 55 TAO:GA_TG VSAO:0000154
icd9cm rdo, bao, doid, mfomd, efo, epso, mondo 54 ICD9CM:060-066.99 DOID:934
go fypo, uberon, omp, ccf, go, pato, vsao, cl, cco, to, aeo, zfa, mi, eco, mp, cmpo, so 54 GO:curators GO:0004479
so fypo, geno, icdo, vario, fbcv, hom, bs, ro, enm, so 52 SO:homologous_to RO:HOM0000007
cba cellosaurus 51 CBA:CBA-0165 Cellosaurus#CVCL:4437
genatlas orphanet 50 Genatlas:TRG@ http://www.orpha.net/ORDO/Orphanet_330902
pid.pathway pw 49 PID:200100 PW:0000238
kegg.compound dto, sibo 48 KEGG COMPOUND:7439-93-2 CHEBI:49713
pdb-ccd chebi, dto 36 PDBeChem:GLU_LFOH CHEBI:16015
chemidplus chebi, dto 35 ChemIDplus:1764436 CHEBI:15355
ncbitaxon taxrank, tto 34 NCBITaxon:species_group TAXRANK:0000010
emapa mmusdv, uberon, ccf 30 EMAPA:th UBERON:0001638
wwf.ecoregion enm, envo 26 WWF:AA1308 ENVO:01001573
aao uberon, ccf 25 AAO:DSM UBERON:3010632
pombase fypo, eco, cmpo, so 24 POMBASE:mah SO:0002028
rgd rs, xco, vt, mmo, cmo, pw, mp 24 RGD:ms VT:0002504
zfin uberon, tao, ccf, go, vsao, cl, zfa, so 24 ZFIN:yb UBERON:0003066
ehdaa2 hsapdv 23 EHDAA2:CS19 HsapDv:0000026
uberon mmusdv, uberon, ccf, vsao, poro, bspo, zfa, enm 22 UBERON:cjm MmusDv:0000036
maizegdb.locus to, zea 22 MaizeGDB:Mary_Schaeffer TO:0000935
obi uberon, geno, pato, vsmo, efo, pride 21 OBI:genetic population background information GENO:0000010
hba uberon, ccf 20 HBA:DTLd UBERON:0002984
cl uberon, tao, ccf, cl, zfa 19 CL:Curator TAO:0005242
dhba uberon, ccf 19 DHBA:GiRt UBERON:0002155
dmba uberon, ccf 19 DMBA:Bar UBERON:0007632
omp omp 18 OMP:JCH OMP:0006049
flybase uberon, ccf, cl, covoc, zfa, bto, so 17 FB:ma CL:0000134
uniprot xco, vario, bs, covoc, eco, so 17 UniProt:curation_manual VariO:0281
to pato, to, peco 16 TO:moorel PECO:0007287
isbn uberon, tgma, idomal, vsmo, tads, hp, fovt, mpath 14 ISBN:0-412-40180-0: IDOMAL:0002188
issn tgma, go, pato, cco, tads, bto 14 ISSN:9781496335418 PATO:0001744
pato pato, to, po, enm, cmpo 14 PATO:MAH PATO:0002632
meddra orphanet, enm, efo, mondo 14 MedDRA:C0239495 http://www.orpha.net/ORDO/Orphanet_615943
caro bila, uberon, wbbt, xao, ccf, idomal, ddanat, cl, aeo, covoc, zfa, enm 13 CARO:00000041 IDOMAL:0002461
bcgo cellosaurus 13 BCGO:BCGO_0000121 Cellosaurus#CVCL:2G62
sgd fypo, vario, fao, apo, cl, so 12 SGD:se SO:0002048
hpscreg cellosaurus 12 hPSCreg:NSI003-A Cellosaurus#CVCL:D0KA
snomedct genepio, omp, efo 12 SNOMED: http://www.snomedbrowser.com/Codes/Details/272405002 GENEPIO:0001719
mpath mpath 12 MPATH:JPS MPATH:882
xao uberon, xao, go 11 XAO:EJS UBERON:3010299
lipidmaps chebi, msio 11 LIPID_MAPS_class:LMPR01 CHEBI:24913
eco hom, ro, eco 11 ECO:00000060 RO:HOM0000017
orcid zfa, fovt, mp 11 ORCID:000-0002-2244-7917 ZFA:0005927
mp uberon, ccf, vt, cl, dermo 10 MP:MP UBERON:0005452
hp uberon, covoc, eco, mp 10 HPO:PCS ECO:0006017
spd spd 10 SPD:Raven_1986 SPD:0000312
neurolex pato, mp 10 neurolex:http://neurolex.org/ PATO:0002216
genpept covoc 10 GenPept:YP_009724395 PR:P0DTC7
wikipedia.en dto, efo 10 Wikipedia:Single cell sequencing EFO:0008913
zfa uberon, tao, go 9 ZFA:CVS UBERON:0018674
ro pato, hom, ro, enm, sdgio, cmpo 9 OBO_REL:has_part PATO:0001555
po to, po, peco 9 PO:Cooperl PECO:0007407
gemet envo 9 GEMET:http://www.eionet.europa.eu/gemet/concept/8128 ENVO:01000538
ma uberon, cl, bspo, enm, envo, bcio, sdgio, aeon 8 MA:ma ENVO:00000386
fao fao, enm, envo 8 FAO:mah FAO:0000026
bspo bspo 8 BSPO:mah BSPO:0000018
fma uberon, ccf, clao 7 FMA:C34070 CLAO:0001186
bfo idomal, vsmo 7 BFO:span:TemporalRegion span:TemporalRegion
aeo uberon, ccf, aeo 6 AEO:000020 UBERON:0001013
prosite go, cco 6 Prosite:PDOC50021 GO:0051401
pr covoc 6 PRO:DAN PR:P0DTC4
dsmz cellosaurus 5 DSMZCellDive:HCC-827BL Cellosaurus#CVCL:S840
nlm uberon, ccf 5 NLM:thymus UBERON:0002370
vto lpt, vt, lbo 5 VTO:CP VT:1000747
doid doid, vsmo, mondo 5 DOID: 2293 VSMO:0000055
pmc wbls, mp, mpath, so 5 PMCID: 1964945 MPATH:499
icd10cm rdo, doid 4 ICD10CM:G73.6* DOID:0090101
cnrs ror 4 cnrs:Q7105570 https://ror.org/05r2k0m61
chebi omp, vsmo, dto 4 CHEBI::4806 OMP:0007848
doi ccf, enm, efo, so 4 DOI:10.1126 SO:0001490
hpa ccf, cl, enm 4 HPA:HPA CL:1001603
umbbd.reaction go, cco 4 UM-BBD_reactionID:1137 GO:0034813
chembl covoc 4 ChEMBL:1201580 COVOC:0030002
orphanet efo, mondo 4 Orphanet:189-text MONDO:0007510
jax efo, mp, so 4 JAX:8075 EFO:0001341
tto tto, vto 4 TTO:curator VTO:0036155
geo cellosaurus, covoc 3 GEO:GSM1860702rmed Cellosaurus#CVCL:S760
vhog uberon, zfa 3 VHOG:FB UBERON:0000112
neuronames uberon 3 neuronames:3451&questID=1771 UBERON:8440026
metacyc.compound chebi, go, cco 3 MetaCyc:(1<arrow>right</arrow>4)-6-phospho-<stereo>alpha</stereo>-<stereo>D</stereo>-glucan CHEBI:134068
fypo omp 3 FYPO:000064 OMP:0007701
vario cido, vario 3 Vario:mv VariO:0017
kupo ccf, cl, zfa 3 KUPO:SJ ZFA:0009374
umbbd.pathway go 3 UM-BBD_pathwayID:2,4-d GO:0018901
reo cl, covoc, enm 3 ReO:mhb CL:0007015
pw pw 3 PW:InHouse PW:0000288
atc covoc 3 ATC: C09BA13 CHEBI:6960
peco peco 3 PECO:laura_moore PECO:0001059
wikidata ror 2 wikidata:https://www.wikidata.org/wiki/Q6156698 https://ror.org/0481m0575
fbdv bao, efo 2 FBdv:0005333 EFO:0001323
ecacc cellosaurus, bto 2 ECACC:European_Collection_of_Cell_Cultures BTO:0006406
insdc genepio 2 INSDC:specimen_voucher GENEPIO:0001722
birnlex uberon 2 BIRNLEX:Limbic_system UBERON:0000349
pba uberon, ccf 2 PBA:BN UBERON:0010011
vt ito, lpt 2 VT::0010808 LPT:0000185
edam ms 2 EDAM:0846 MS:1000864
gc ccf, cl 2 GC:tfm CL:0002597
cgd fao, apo 2 CGD:mcc APO:0000319
qtldb cmo 2 QTLdb:animal_QTL_data CMO:0000403
envo pato, envo 2 ENVO:pb PATO:0015018
biogrid apo 2 BioGRID:mcc APO:0000318
sgn to, po 2 SGN:Naama_Menda PO:0008001
iedb covoc, mondo 2 IEDB:RV MONDO:0025518
medlineplus efo, bto 2 MedlinePlus:A_service_of_the_U.S._National_Library_of_Medicine_From_the_National_Institutes_of_Health BTO:0005035
cldb bto 2 HyperCLDB:http://bioinformatics.istge.it/ BTO:0005030
encode cellosaurus 1 ENCODE:ENCBS552 IDC Cellosaurus#CVCL:0004
metabolights cellosaurus 1 MetaboLights:MTBL1140 Cellosaurus#CVCL:0493
nrfc cellosaurus 1 NRFC:NFRC012 Cellosaurus#CVCL:1G77
skip cellosaurus 1 SKIP:SKIP00134O Cellosaurus#CVCL:A4NA
tngb cellosaurus 1 TNGB:TNGB-22276 Cellosaurus#CVCL:A5RS
caloha uberon 1 CALOHA:paula UBERON:0007808
apo omp 1 APO::0000051 OMP:0007101
ms vt 1 MS:RGD VT:0010213
taxrank taxrank 1 TAXRANK:curator TAXRANK:0000000
goa go 1 GOA:als GO:1903985
uniprot.keyword go 1 UniProtKB-KW:KW-984 GO:0039664
hao spd 1 HAO:HAO:0000353 SPD:0000820
mi vario 1 MI:0000704 VariO:0272
ecg cmo 1 ECGOntology:<new dbxref> CMO:0000278
brenda cmo 1 BRENDA:EC2.3.2.2 CMO:0001921
olatdv olatdv 1 OlatDv:curators OlatDv:0000340
sao cl 1 SAO:sao131261273 CL:1001571
asin plana 1 ASIN:B000M4NK9M PLANA:0007535
pfam cco 1 Pfam:PF02174.5 GO:0051425
vo vsmo 1 VO:Authors VO:0003021
fbbt aeo 1 FBbt:DOS AEO:0000211
langual enm 1 LANGUAL:C0195 FOODON:00001216
reaxys dto 1 Reaxys:82337-46-0 CHEBI:34144
tads efo 1 TADS:000315 EFO:0000935
tgma efo 1 TGMA:000136 EFO:0000965
ncim efo 1 NCIm:CL455363 EFO:0003918
ido efo 1 IDO:IDO_0000436 EFO:0005741
uniprot.disease efo 1 DI:00917 EFO:0010956
disprot eco 1 DisProt:BalintMeszaros ECO:0006190
ero eco 1 ERO:0000329|URL:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3907272/ ECO:0007043
ena.embl eco 1 ENA:Peter ECO:0008014
bs envo 1 BS:bs ENVO:00000147
obcs pride 1 OBCS:YQH OBCS:0000059
fishbase.species bto 1 Fishbase:http://www.fishbase.org/Glossary/Glossary.cfm?TermEnglish=venom+apparatus BTO:0002065
nasc bto 1 NASC:The_European_Arabidopsis_Stock_Centre BTO:0003086
google.patent bto 1 Patent:CA_Patent_2469027 BTO:0004841
lonza bto 1 Lonza:www.lonza.com/ BTO:0006077
gard mondo 1 GARD:0003995-def MONDO:0044749
xenbase so 1 xenbase:jb SO:0001203
rfam so 1 RFAM:jd SO:0001459
sibo sibo 1 SIBO:csmith SIBO:0000079